The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032895921.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032895922.1 | TETRASPANIN |
| XP_032895923.1 | TETRASPANIN |
| XP_032895924.1 | TETRASPANIN |
| XP_032895925.1 | FRIZZLED |
| XP_032895926.1 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) |
| XP_032895927.1 | FRIZZLED |
| XP_032895928.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895929.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895930.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895931.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895932.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895933.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895934.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895935.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895936.1 | ADENOSYLHOMOCYSTEINASE |
| XP_032895937.1 | PROTEIN REQUIRED FOR HYPHAL ANASTOMOSIS HAM-2 |
| XP_032895938.1 | SMALL LYSINE-RICH PROTEIN 1 |
| XP_032895939.1 | UNCHARACTERIZED |
| XP_032895940.1 | PROTEIN CBG26694 |
| XP_032895941.1 | UNCHARACTERIZED |
| XP_032895942.1 | THAP DOMAIN PROTEIN |
| XP_032895943.1 | THAP DOMAIN PROTEIN |
| XP_032895944.1 | VACUOLAR CALCIUM ION TRANSPORTER |
| XP_032895945.1 | VACUOLAR CALCIUM ION TRANSPORTER |
| XP_032895946.1 | NUCLEAR-INTERACTING PARTNER OF ALK |
| XP_032895947.1 | NUCLEAR-INTERACTING PARTNER OF ALK |
| XP_032895948.1 | KELCH DOMAIN-CONTAINING PROTEIN 10 |
| XP_032895949.1 | KELCH DOMAIN-CONTAINING PROTEIN 10 |
| XP_032895950.1 | KELCH DOMAIN-CONTAINING PROTEIN 10 |
| XP_032895951.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032895952.1 | AGAP003327-PA |
| XP_032895953.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895954.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895955.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895956.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895957.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895958.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895959.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895960.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895961.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895962.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895963.1 | NUCLEAR RESPIRATORY FACTOR 1 |
| XP_032895964.1 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| XP_032895965.1 | RETICULOPHAGY REGULATOR 3 |
| XP_032895966.1 | CENTROSOMAL PROTEIN OF 41 KDA |
| XP_032895967.1 | CENTROSOMAL PROTEIN OF 41 KDA |
| XP_032895968.1 | CENTROSOMAL PROTEIN OF 41 KDA |
| XP_032895969.1 | CENTROSOMAL PROTEIN OF 41 KDA |
| XP_032895970.1 | MONOACYLGLYCEROL LIPASE |
