The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032895021.1 | SOLUTE CARRIER FAMILY 22 MEMBER 18 |
| XP_032895022.1 | ALPHA-PROTEIN KINASE 2-RELATED |
| XP_032895023.1 | TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 |
| XP_032895024.1 | TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 |
| XP_032895025.1 | PLECKSTRIN HOMOLOGY-LIKE DOMAIN, PQ-RICH PROTEIN |
| XP_032895026.1 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| XP_032895027.1 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| XP_032895028.1 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| XP_032895029.1 | CYSTEINYL-TRNA SYNTHETASE |
| XP_032895030.1 | CYSTEINYL-TRNA SYNTHETASE |
| XP_032895031.1 | CYSTEINYL-TRNA SYNTHETASE |
| XP_032895032.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| XP_032895033.1 | PROTEIN-TYROSINE-PHOSPHATASE |
| XP_032895034.1 | PROTEIN-TYROSINE-PHOSPHATASE |
| XP_032895035.1 | TRIOKINASE/FMN CYCLASE |
| XP_032895036.1 | TRIOKINASE/FMN CYCLASE |
| XP_032895037.1 | TRIOKINASE/FMN CYCLASE |
| XP_032895038.1 | SPERIOLIN |
| XP_032895039.1 | TRIOKINASE/FMN CYCLASE |
| XP_032895040.1 | TRIOKINASE/FMN CYCLASE |
| XP_032895041.1 | TITIN |
| XP_032895042.1 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
| XP_032895043.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| XP_032895044.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| XP_032895045.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| XP_032895046.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| XP_032895047.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| XP_032895048.1 | AROMATIC AMINO ACID HYDROXYLASE |
| XP_032895049.1 | INSULIN-LIKE GROWTH FACTOR II |
| XP_032895050.1 | RIBOSOMAL PROTEIN L23-RELATED |
| XP_032895051.1 | RIBOSOMAL PROTEIN L23-RELATED |
| XP_032895052.1 | RIBOSOMAL PROTEIN L23-RELATED |
| XP_032895053.1 | |
| XP_032895054.1 | |
| XP_032895055.1 | MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED |
| XP_032895056.1 | MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED |
| XP_032895057.1 | - |
| XP_032895058.1 | - |
| XP_032895059.1 | 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER |
| XP_032895060.1 | 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER |
| XP_032895061.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED |
| XP_032895062.1 | RAS-RELATED PROTEIN RAB |
| XP_032895063.1 | DNA2/NAM7 HELICASE FAMILY MEMBER |
| XP_032895064.1 | 50S RIBOSOMAL PROTEIN L21 |
| XP_032895065.1 | SYNAPTOTAGMIN |
| XP_032895066.1 | SYNAPTOTAGMIN |
| XP_032895067.1 | PHOSPHATIDYLINOSITOL SYNTHASE |
| XP_032895068.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| XP_032895069.1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| XP_032895070.1 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
