The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032894871.1 | UNCHARACTERIZED |
| XP_032894872.1 | HYPOTHETICAL PROTEIN LOC691189 |
| XP_032894873.1 | ASPARTYL PROTEASE DDI-RELATED |
| XP_032894874.1 | TRANSMEMBRANE PROTEIN 9 FAMILY MEMBER |
| XP_032894875.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| XP_032894876.1 | VWFA DOMAIN-CONTAINING PROTEIN |
| XP_032894877.1 | VWFA DOMAIN-CONTAINING PROTEIN |
| XP_032894878.1 | DENN DOMAIN-CONTAINING PROTEIN 2 |
| XP_032894879.1 | DENN DOMAIN-CONTAINING PROTEIN 2 |
| XP_032894880.1 | 60S RIBOSOMAL PROTEIN L27A |
| XP_032894881.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| XP_032894882.1 | TAPASIN |
| XP_032894883.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| XP_032894884.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| XP_032894885.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| XP_032894886.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| XP_032894887.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| XP_032894888.1 | ATP-BINDING CASSETTE SUB-FAMILY C |
| XP_032894889.1 | INWARD RECTIFIER POTASSIUM CHANNEL |
| XP_032894890.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| XP_032894891.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| XP_032894892.1 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| XP_032894893.1 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| XP_032894894.1 | BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED |
| XP_032894895.1 | MYOGENIC FACTOR |
| XP_032894896.1 | FERRITIN |
| XP_032894897.1 | CYTOSOLIC 5'-NUCLEOTIDASE 1 FAMILY MEMBER |
| XP_032894898.1 | CYTOSOLIC 5'-NUCLEOTIDASE 1 FAMILY MEMBER |
| XP_032894899.1 | SYNAPTOTAGMIN |
| XP_032894900.1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| XP_032894901.1 | O-ACYLTRANSFERASE |
| XP_032894902.1 | TROPONIN I |
| XP_032894903.1 | TROPONIN I |
| XP_032894904.1 | TROPONIN I |
| XP_032894905.1 | CALDESMON |
| XP_032894906.1 | CALDESMON |
| XP_032894907.1 | CALDESMON |
| XP_032894908.1 | CALDESMON |
| XP_032894909.1 | PROLINE-RICH PROTEIN 33 |
| XP_032894910.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032894911.1 | TROPONIN T |
| XP_032894912.1 | TROPONIN T |
| XP_032894913.1 | TROPONIN T |
| XP_032894914.1 | TROPONIN T |
| XP_032894915.1 | TROPONIN T |
| XP_032894916.1 | TROPONIN T |
| XP_032894917.1 | TROPONIN T |
| XP_032894918.1 | TROPONIN T |
| XP_032894919.1 | TROPONIN T |
| XP_032894920.1 | TROPONIN T |
