About Placopecten magellanicus

The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.

Classification

Animalia (Kingdom); Mollusca (Phylum); Bivalvia (Class); Autobranchia (Subclass); Pteriomorphia (Infraclass); Pectinida (Order); Pectinoidea (Superfamily); Pectinidae (Family); Palliolinae (Subfamily); Palliolini (Tribe); Placopecten (Genus); Placopecten magellanicus (Species)

Original Name

Ostrea magellanica Gmelin, 1791

Key Reference Paper

1. Gmelin J F. Caroli Linnaei systema naturae per regna fria naturae. Ed. 13, aucta, reformata, Vermes Testacea[J]. Lipsiae, 1791, 1(6): 3021-3910. (Gmelin et al., 1791)

Description

The shell has a classic form, with smooth shell and edges, unlike Pecten maximus (common name the "great scallop" or "king scallop") which has flutes and scalloped edges; size is around 80 millimetres (3+1⁄4 in), with individuals up to 170 millimetres (6+3⁄4 in) in diameter. The shell is generally pinkish-red in color, with striped variegation to darker shades appearing in many individuals. The adductor muscle itself is large, often 30–40 millimetres (1+1⁄4–1+1⁄2 in) in diameter. Like all scallops, P. magellanicus has photoreceptive eyes along the edge of the pinkish mantle.

Distribution

51.7°N to 35.3°N; 75°W to 56°W, Labrador to Cape Hatteras, North Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Placopecten magellanicusMolluscadeep-sea scallopHydrothermal vent0-384Dalian in the Liaoning Province of China (38.43 N 120.91 E)6577

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-1.83GbChromosome2023-Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research InstitutePRJNA92312394.10 86,713/6,53538.0643.0428,111

References
TitleJournalPubmed ID
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallopsGenomics37977331

Gene Information

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Gene IDDescription
PMEG.utg000290l.27TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 13
PMEG.utg000290l.28CENTROCORTIN FAMILY MEMBER
PMEG.utg000290l.29CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
PMEG.utg000290l.3EGF-LIKE DOMAIN-CONTAINING PROTEIN
PMEG.utg000290l.30DNA-DIRECTED RNA POLYMERASES III 80 KDA POLYPEPTIDE RNA POLYMERASE III SUBUNIT 5
PMEG.utg000290l.3128 KDA HEAT- AND ACID-STABLE PHOSPHOPROTEIN PDGF-ASSOCIATED PROTEIN
PMEG.utg000290l.32PROTEIN BUD31-RELATED
PMEG.utg000290l.4BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
PMEG.utg000290l.5PRE-MRNA-SPLICING FACTOR RBM22
PMEG.utg000290l.6WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED
PMEG.utg000290l.7AT29763P-RELATED
PMEG.utg000290l.8ALPHA- 1,3 -FUCOSYLTRANSFERASE
PMEG.utg000290l.9ALPHA- 1,3 -FUCOSYLTRANSFERASE
PMEG.utg000291l.1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
PMEG.utg000291l.10PHOSPHOGLYCERATE MUTASE
PMEG.utg000291l.11PROTEIN TORNADO 1
PMEG.utg000291l.12PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2
PMEG.utg000291l.13CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
PMEG.utg000291l.14BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
PMEG.utg000291l.15-
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