About Amblyraja radiata

The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Amblyraja radiataChordatathorny skateHydrothermal vent~1500Tocopilla, northern Chile386614

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
sAmbRad1.1.pri2.6GbChromosome2020JAAGWR01Vertebrate Genomes ProjectPRJNA591369-18,474

Gene Information

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Gene IDDescription
XP_032894421.1TRANSCRIPTION INTERMEDIARY FACTOR
XP_032894422.1TRANSCRIPTION INTERMEDIARY FACTOR
XP_032894423.1TRANSCRIPTION INTERMEDIARY FACTOR
XP_032894424.1
XP_032894425.1FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
XP_032894426.1INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN
XP_032894427.1INTERFERON REGULATORY FACTOR
XP_032894428.1PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
XP_032894429.1NEL HOMOLOG
XP_032894430.1NEL HOMOLOG
XP_032894431.1CORTACTIN AND DREBRIN
XP_032894432.1
XP_032894433.1COILED-COIL DOMAIN-CONTAINING PROTEIN 73
XP_032894434.14-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER
XP_032894435.1DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1
XP_032894436.1DOUBLECORTIN DOMAIN-CONTAINING PROTEIN 1
XP_032894437.1ARL14 EFFECTOR PROTEIN
XP_032894438.1UNCHARACTERIZED
XP_032894439.1SIMILAR TO RIKEN CDNA A930018P22
XP_032894440.1ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN
XP_032894441.1RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
XP_032894442.1EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
XP_032894443.1ETS
XP_032894444.1SYNAPTOTAGMIN
XP_032894445.1OXIDASE/PEROXIDASE
XP_032894446.1BESTROPHIN
XP_032894447.1INNER CENTROMERE PROTEIN
XP_032894448.1INNER CENTROMERE PROTEIN
XP_032894449.1
XP_032894450.1SODIUM/HYDROGEN EXCHANGER
XP_032894451.1CYTOKINE RECEPTOR
XP_032894452.1CYTOKINE RECEPTOR
XP_032894453.1CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR
XP_032894454.1SUGAR TRANSPORTER
XP_032894455.1TESTIS-SPECIFIC SERINE KINASE SUBSTRATE
XP_032894456.1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
XP_032894457.1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
XP_032894458.1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
XP_032894459.1CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBER
XP_032894460.1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
XP_032894461.1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
XP_032894462.1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
XP_032894463.1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
XP_032894464.1G-PROTEIN COUPLED RECEPTOR
XP_032894465.1EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
XP_032894466.1G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
XP_032894467.1G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN
XP_032894468.12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
XP_032894469.1CYTOCHROME P450 508A4-RELATED
XP_032894470.1G-PROTEIN COUPLED RECEPTOR
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