The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032894221.1 | MIP04163P |
| XP_032894222.1 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| XP_032894223.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| XP_032894224.1 | MYOD FAMILY INHIBITOR |
| XP_032894225.1 | MYOD FAMILY INHIBITOR |
| XP_032894226.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032894227.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032894228.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032894229.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032894230.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032894231.1 | FORKHEAD BOX P, ISOFORM C |
| XP_032894232.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT |
| XP_032894233.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032894234.1 | ZINC FINGER PROTEIN |
| XP_032894235.1 | ZINC FINGER PROTEIN |
| XP_032894236.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032894237.1 | NXPE FAMILY MEMBER |
| XP_032894238.1 | CEREBELLIN-RELATED |
| XP_032894239.1 | PARATHYROID HORMONE-RELATED |
| XP_032894240.1 | PARATHYROID HORMONE-RELATED |
| XP_032894241.1 | KUNITZ-TYPE PROTEASE INHIBITOR 1 |
| XP_032894242.1 | |
| XP_032894243.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| XP_032894244.1 | ETS |
| XP_032894245.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| XP_032894246.1 | RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN |
| XP_032894247.1 | INTERLEUKIN-22 |
| XP_032894248.1 | ANKYCORBIN |
| XP_032894249.1 | DNA2/NAM7 HELICASE FAMILY MEMBER |
| XP_032894250.1 | AGAP005574-PA |
| XP_032894251.1 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
| XP_032894252.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| XP_032894253.1 | DERMATOPONTIN-RELATED |
| XP_032894254.1 | TESTIS-EXPRESSED PROTEIN 52 |
| XP_032894255.1 | VWFA DOMAIN-CONTAINING PROTEIN |
| XP_032894256.1 | STIMULATED BY RETINOIC ACID GENE 8 PROTEIN HOMOLOG |
| XP_032894257.1 | XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER |
| XP_032894258.1 | BCL-2 RELATED |
| XP_032894259.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| XP_032894260.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| XP_032894261.1 | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER |
| XP_032894262.1 | BICAUDAL D FAMILY MEMBER |
| XP_032894263.1 | SOLUTE CARRIER FAMILY 13 MEMBER |
| XP_032894264.1 | CADHERIN-23 |
| XP_032894265.1 | LACTOSYLCERAMIDE 4-ALPHA-GALACTOSYLTRANSFERASE ALPHA- 1,4-GALACTOSYLTRANSFERASE |
| XP_032894266.1 | INTERLEUKIN-6 |
| XP_032894267.1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032894268.1 | POLYCYSTIN FAMILY MEMBER |
| XP_032894269.1 | |
| XP_032894270.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
