About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Hydrothermal vent2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-560.7MbContig2022-University of ViennaPRJNA75449399.37%25,984
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504795.60%37,037

References
TitleJournalPubmed ID
Novel Insights on Obligate Symbiont Lifestyle and Adaptation to Chemosynthetic Environment as Revealed by the Giant Tubeworm GenomeMolecular Biology and Evolution34893862
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

<< First 505 506 507 508 509 510 511 512 513 514 Forward> Last>>        604 pages in total

Gene IDDescription
RPACG22655.1
RPACG22656.1NEUROPEPTIDES RECEPTOR
RPACG22657.1
RPACG22658.1CYTOCHROME B5
RPACG22659.1REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
RPACG22660.1DYNEIN LIGHT CHAIN ROADBLOCK
RPACG22661.1DER1-LIKE PROTEIN, DERLIN
RPACG22662.1TYROSINE-PROTEIN KINASE
RPACG22663.1
RPACG22664.1RECEPTOR TRANSPORTING PROTEIN
RPACG22665.1B-BOX DOMAIN CONTAINING
RPACG22666.1
RPACG22667.1RE38146P
RPACG22668.1
RPACG22669.1
RPACG22670.1
RPACG22671.1
RPACG22672.1
RPACG22673.1
RPACG22674.1
RPACG22675.1
RPACG22676.1
RPACG22676.2
RPACG22677.1
RPACG22677.2
RPACG22678.1
RPACG22679.1
RPACG22680.1
RPACG22681.1ESPIN
RPACG22682.1DUF853 DOMAIN-CONTAINING PROTEIN
RPACG22682.2
RPACG22683.1
RPACG22684.1
RPACG22685.1RIKEN CDNA D130052B06 GENE
RPACG22686.1
RPACG22687.1SRCR DOMAIN-CONTAINING PROTEIN
RPACG22688.1UNCHARACTERIZED
RPACG22689.1
RPACG22690.1PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7
RPACG22691.1
RPACG22692.1PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7
RPACG22693.1
RPACG22694.1
RPACG22695.1
RPACG22696.1
RPACG22697.1UNCHARACTERIZED
RPACG22698.1PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY G MEMBER 7
RPACG22699.1
RPACG22700.1
RPACG22701.1CHLORIDE CHANNEL PROTEIN 2
TOP