The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032892171.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| XP_032892172.1 | ZINC FINGER PROTEIN 142 |
| XP_032892173.1 | ZINC FINGER PROTEIN 142 |
| XP_032892174.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032892175.1 | CASEIN KINASE-RELATED |
| XP_032892176.1 | UNCHARACTERIZED |
| XP_032892177.1 | CRANIOFACIAL DEVELOPMENT PROTEIN 1 |
| XP_032892178.1 | CRANIOFACIAL DEVELOPMENT PROTEIN 1 |
| XP_032892179.1 | CAS SCAFFOLDING PROTEIN |
| XP_032892180.1 | CAS SCAFFOLDING PROTEIN |
| XP_032892181.1 | CAS SCAFFOLDING PROTEIN |
| XP_032892182.1 | CAS SCAFFOLDING PROTEIN |
| XP_032892183.1 | CAS SCAFFOLDING PROTEIN |
| XP_032892184.1 | CAS SCAFFOLDING PROTEIN |
| XP_032892185.1 | CAS SCAFFOLDING PROTEIN |
| XP_032892186.1 | CELL ADHESION MOLECULE |
| XP_032892187.1 | CHEMOTACTIC RECEPTOR |
| XP_032892188.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| XP_032892189.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| XP_032892190.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| XP_032892191.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| XP_032892192.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| XP_032892193.1 | NFAT |
| XP_032892194.1 | NFAT |
| XP_032892195.1 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 |
| XP_032892196.1 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| XP_032892197.1 | TRNA-DIHYDROURIDINE(20) SYNTHASE [NAD(P)+]-LIKE |
| XP_032892198.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| XP_032892199.1 | MICROSOMAL DIPEPTIDASE |
| XP_032892200.1 | MICROSOMAL DIPEPTIDASE |
| XP_032892201.1 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| XP_032892202.1 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| XP_032892203.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| XP_032892204.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| XP_032892205.1 | PHOSPHOLIPID ACYLTRANSFERASE |
| XP_032892206.1 | MATRIX METALLOPROTEINASE |
| XP_032892207.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| XP_032892208.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892209.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892210.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892211.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892212.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892213.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892214.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892215.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892216.1 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| XP_032892217.1 | RETINITIS PIGMENTOSA GTPASE REGULATOR-INTERACTING PROTEIN |
| XP_032892218.1 | RETINITIS PIGMENTOSA GTPASE REGULATOR-INTERACTING PROTEIN |
| XP_032892219.1 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE FTO |
| XP_032892220.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
