The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032892021.1 | PROTEIN ARGININE N-METHYLTRANSFERASE |
| XP_032892022.1 | SPHINGOMYELINASE FAMILY MEMBER |
| XP_032892023.1 | ZINC FINGER PROTEIN |
| XP_032892024.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032892025.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032892026.1 | UPF0183 PROTEIN |
| XP_032892027.1 | UPF0183 PROTEIN |
| XP_032892028.1 | UPF0183 PROTEIN |
| XP_032892029.1 | UPF0183 PROTEIN |
| XP_032892030.1 | CORE-BINDING FACTOR, BETA SUBUNIT |
| XP_032892031.1 | CORE-BINDING FACTOR, BETA SUBUNIT |
| XP_032892032.1 | CORE-BINDING FACTOR, BETA SUBUNIT |
| XP_032892033.1 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| XP_032892034.1 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| XP_032892035.1 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| XP_032892036.1 | 60S RIBOSOMAL PROTEIN L35 |
| XP_032892037.1 | TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN |
| XP_032892038.1 | TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN |
| XP_032892039.1 | TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN |
| XP_032892040.1 | TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN |
| XP_032892041.1 | TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN |
| XP_032892042.1 | HEAT SHOCK TRANSCRIPTION FACTOR |
| XP_032892043.1 | UNCHARACTERIZED |
| XP_032892044.1 | UNCHARACTERIZED |
| XP_032892045.1 | ZINC FINGER PROTEIN 142 |
| XP_032892046.1 | ZINC FINGER PROTEIN |
| XP_032892047.1 | PEPTIDASE S8 |
| XP_032892048.1 | PEPTIDASE S8 |
| XP_032892049.1 | PEPTIDASE S8 |
| XP_032892050.1 | SERINE-THREONINE PROTEIN KINASE |
| XP_032892051.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032892052.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032892053.1 | UNCHARACTERIZED |
| XP_032892054.1 | FATTY ACID HYDROXYLASE |
| XP_032892055.1 | E3 UBIQUITIN-PROTEIN LIGASE ZNRF1-LIKE PROTEIN |
| XP_032892056.1 | E3 UBIQUITIN-PROTEIN LIGASE ZNRF1-LIKE PROTEIN |
| XP_032892057.1 | D-LACTATE DEHYDROGENASE |
| XP_032892058.1 | GOLGI-ASSOCIATED KINASE 1B-RELATED |
| XP_032892059.1 | GOLGI-ASSOCIATED KINASE 1B-RELATED |
| XP_032892060.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| XP_032892061.1 | ANOCTAMIN |
| XP_032892062.1 | ANOCTAMIN |
| XP_032892063.1 | ANOCTAMIN |
| XP_032892064.1 | ANOCTAMIN |
| XP_032892065.1 | LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED |
| XP_032892066.1 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
| XP_032892067.1 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
| XP_032892068.1 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
| XP_032892069.1 | LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED |
| XP_032892070.1 | UNCHARACTERIZED |
