Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00241010 | NEUROLIGIN |
| SKAU_T00241020 | |
| SKAU_T00241030 | |
| SKAU_T00241040 | |
| SKAU_T00241050 | ANOSMIN |
| SKAU_T00241060 | WD40 REPEAT PROTEIN |
| SKAU_T00241070 | G-PROTEIN COUPLED RECEPTOR 143 |
| SKAU_T00241080 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00241090 | MYELIN PROTEOLIPID |
| SKAU_T00241100 | RAB FAMILY |
| SKAU_T00241110 | PA14 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00241120 | |
| SKAU_T00241130 | |
| SKAU_T00241140 | |
| SKAU_T00241150 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| SKAU_T00241160 | RHO-GTPASE-ACTIVATING PROTEIN 6 FAMILY MEMBER |
| SKAU_T00241170 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00241180 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00241190 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00241200 | |
| SKAU_T00241210 | |
| SKAU_T00241220 | CHONDROMODULIN-RELATED |
| SKAU_T00241230 | CADHERIN-87A |
| SKAU_T00241240 | |
| SKAU_T00241250 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00241260 | CADHERIN-87A |
| SKAU_T00241270 | |
| SKAU_T00241280 | |
| SKAU_T00241290 | |
| SKAU_T00241300 | |
| SKAU_T00241310 | SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED |
| SKAU_T00241320 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
| SKAU_T00241330 | CADHERIN-87A |
| SKAU_T00241340 | POU DOMAIN |
| SKAU_T00241350 | |
| SKAU_T00241360 | NEDD4 FAMILY INTERACTING PROTEIN 1/2 |
| SKAU_T00241370 | |
| SKAU_T00241380 | |
| SKAU_T00241390 | |
| SKAU_T00241400 | |
| SKAU_T00241410 | |
| SKAU_T00241420 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00241430 | |
| SKAU_T00241440 | SLIT AND NTRK-LIKE PROTEIN 4-RELATED |
| SKAU_T00241450 | |
| SKAU_T00241460 | |
| SKAU_T00241470 | |
| SKAU_T00241480 | |
| SKAU_T00241490 | BASIGIN RELATED |
| SKAU_T00241500 | HISTONE DEACETYLASE HDAC1-RELATED |
