Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00238010 | PROTEIN CBG26694 |
| SKAU_T00238020 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00238030 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED |
| SKAU_T00238040 | KH DOMAIN CONTAINING RNA BINDING PROTEIN |
| SKAU_T00238050 | - |
| SKAU_T00238060 | 3-HYDROXYACYL-COA DEHYROGENASE |
| SKAU_T00238070 | 3-HYDROXYACYL-COA DEHYROGENASE |
| SKAU_T00238080 | UPF0524 PROTEIN C3ORF70 |
| SKAU_T00238090 | |
| SKAU_T00238100 | VACUOLAR PROTEIN SORTING VPS41 |
| SKAU_T00238110 | PROTEIN VAV |
| SKAU_T00238120 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| SKAU_T00238130 | VACUOLAR PROTEIN SORTING VPS41 |
| SKAU_T00238140 | DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER |
| SKAU_T00238150 | E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE |
| SKAU_T00238160 | E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE |
| SKAU_T00238170 | |
| SKAU_T00238180 | COLLAGEN ALPHA |
| SKAU_T00238190 | COLLAGEN ALPHA |
| SKAU_T00238200 | COLLAGEN ALPHA |
| SKAU_T00238210 | ZGC:162816-RELATED |
| SKAU_T00238220 | PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE |
| SKAU_T00238230 | 60S RIBOSOMAL PROTEIN L43 |
| SKAU_T00238240 | |
| SKAU_T00238250 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00238260 | |
| SKAU_T00238270 | |
| SKAU_T00238280 | |
| SKAU_T00238290 | |
| SKAU_T00238300 | |
| SKAU_T00238310 | SI:CH211-266K2.1 |
| SKAU_T00238320 | COLLAGEN ALPHA |
| SKAU_T00238330 | ZGC:162816-RELATED |
| SKAU_T00238340 | TRANSMEMBRANE PROTEIN 169 |
| SKAU_T00238350 | PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE |
| SKAU_T00238360 | 60S RIBOSOMAL PROTEIN L43 |
| SKAU_T00238370 | |
| SKAU_T00238380 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00238390 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00238400 | |
| SKAU_T00238410 | |
| SKAU_T00238420 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| SKAU_T00238430 | |
| SKAU_T00238440 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| SKAU_T00238450 | PHOSPHOFRUCTOKINASE |
| SKAU_T00238460 | SERINE-THREONINE PROTEIN KINASE |
| SKAU_T00238470 | LEUCINE RICH REPEAT PROTEIN |
| SKAU_T00238480 | ORIGIN RECOGNITION COMPLEX SUBUNIT 2 |
| SKAU_T00238490 | HYCCIN RELATED |
| SKAU_T00238500 |
