The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032891621.1 | CYTOCHROME B5 |
| XP_032891622.1 | PROTEASE-ASSOCIATED DOMAIN-CONTAINING PROTEIN |
| XP_032891623.1 | TELOMERIC REPEAT-BINDING FACTOR 2 TERF2 |
| XP_032891624.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032891625.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032891626.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032891627.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032891628.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032891629.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032891630.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032891631.1 | ATP-DEPENDENT RNA HELICASE |
| XP_032891632.1 | KALLIKREIN-RELATED |
| XP_032891633.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED |
| XP_032891634.1 | POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED |
| XP_032891635.1 | POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED |
| XP_032891636.1 | POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED |
| XP_032891637.1 | SET AND MYND DOMAIN-CONTAINING PROTEIN 5 |
| XP_032891638.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032891639.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032891640.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032891641.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032891642.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032891643.1 | SIDEROFLEXIN |
| XP_032891644.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032891645.1 | 5-KETO-D-GLUCONATE 5-REDUCTASE |
| XP_032891646.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC |
| XP_032891647.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC |
| XP_032891648.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC |
| XP_032891649.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC |
| XP_032891650.1 | CELL DIVISION PROTEIN KINASE |
| XP_032891651.1 | CHARGED MULTIVESICULAR BODY PROTEIN |
| XP_032891652.1 | BETA-CAROTENE DIOXYGENASE |
| XP_032891653.1 | GLYCINE CLEAVAGE SYSTEM H PROTEIN |
| XP_032891654.1 | LD33804P |
| XP_032891655.1 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73 |
| XP_032891656.1 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 73 |
| XP_032891657.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| XP_032891658.1 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
| XP_032891659.1 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
| XP_032891660.1 | BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA |
| XP_032891661.1 | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 |
| XP_032891662.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
| XP_032891663.1 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
| XP_032891664.1 | M-PHASE PHOSPHOPROTEIN 6 |
| XP_032891665.1 | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 |
| XP_032891666.1 | CADHERIN-23 |
| XP_032891667.1 | - |
| XP_032891668.1 | HEAT SHOCK FACTOR BINDING PROTEIN 1 |
| XP_032891669.1 | HEAT SHOCK FACTOR BINDING PROTEIN 1 |
| XP_032891670.1 | PQ-LOOP REPEAT-CONTAINING PROTEIN 1-LIKE PROTEIN |
