The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032891571.1 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
| XP_032891572.1 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
| XP_032891573.1 | ATP-DEPENDENT PROTEASE |
| XP_032891574.1 | DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN |
| XP_032891575.1 | SPERMATOGENESIS-ASSOCIATED 4-RELATED |
| XP_032891576.1 | DYNEIN REGULATORY COMPLEX SUBUNIT 4 |
| XP_032891577.1 | URICASE AND TRANSTHYRETIN-RELATED |
| XP_032891578.1 | URICASE AND TRANSTHYRETIN-RELATED |
| XP_032891579.1 | URICASE AND TRANSTHYRETIN-RELATED |
| XP_032891580.1 | URICASE AND TRANSTHYRETIN-RELATED |
| XP_032891581.1 | URICASE AND TRANSTHYRETIN-RELATED |
| XP_032891582.1 | URICASE AND TRANSTHYRETIN-RELATED |
| XP_032891583.1 | CADHERIN-23 |
| XP_032891584.1 | CADHERIN-23 |
| XP_032891585.1 | DIPHOSPHOMEVALONATE DECARBOXYLASE |
| XP_032891586.1 | CYTOCHROME B-245 LIGHT CHAIN |
| XP_032891587.1 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| XP_032891588.1 | ZINC FINGER PROTEIN |
| XP_032891589.1 | CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 |
| XP_032891590.1 | CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 |
| XP_032891591.1 | ZINC FINGER, RING/FYVE/PHD-TYPE |
| XP_032891592.1 | DNA REPLICATION FACTOR CDT1 |
| XP_032891593.1 | ADENINE PHOSPHORIBOSYLTRANSFERASE |
| XP_032891594.1 | ZINC FINGER PROTEIN |
| XP_032891595.1 | ZINC FINGER PROTEIN |
| XP_032891596.1 | ZINC FINGER PROTEIN |
| XP_032891597.1 | ZINC FINGER PROTEIN |
| XP_032891598.1 | ATAXIN 1 |
| XP_032891599.1 | RNA-BINDING PROTEIN NOB1 |
| XP_032891600.1 | APOLIPOPROTEIN L |
| XP_032891601.1 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8 |
| XP_032891602.1 | DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED |
| XP_032891603.1 | DIHYDROOROTATE DEHYDROGENASE (QUINONE), MITOCHONDRIAL-RELATED |
| XP_032891604.1 | IST1 FAMILY MEMBER |
| XP_032891605.1 | IST1 FAMILY MEMBER |
| XP_032891606.1 | IST1 FAMILY MEMBER |
| XP_032891607.1 | IST1 FAMILY MEMBER |
| XP_032891608.1 | IST1 FAMILY MEMBER |
| XP_032891609.1 | SODIUM-BILE ACID COTRANSPORTER |
| XP_032891610.1 | CARBOHYDRATE SULFOTRANSFERASE |
| XP_032891611.1 | CARBOHYDRATE SULFOTRANSFERASE |
| XP_032891612.1 | CHAPERONIN |
| XP_032891613.1 | CHST5 PROTEIN |
| XP_032891614.1 | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED |
| XP_032891615.1 | TRNA-SPECIFIC ADENOSINE DEAMINASE 1 |
| XP_032891616.1 | TRNA-SPECIFIC ADENOSINE DEAMINASE 1 |
| XP_032891617.1 | TRNA-SPECIFIC ADENOSINE DEAMINASE 1 |
| XP_032891618.1 | LYSYL-TRNA SYNTHETASE |
| XP_032891619.1 | LYSYL-TRNA SYNTHETASE |
| XP_032891620.1 | NFAT |
