About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold992.6125
mRNA.BJAM.scaffold992.6126SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN
mRNA.BJAM.scaffold9924.21007
mRNA.BJAM.scaffold9925.21008SERYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold9925.21009PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED
mRNA.BJAM.scaffold9925.21010
mRNA.BJAM.scaffold9927.21011
mRNA.BJAM.scaffold9933.21012AROMATIC AMINO ACID HYDROXYLASE
mRNA.BJAM.scaffold9934.21013
mRNA.BJAM.scaffold9936.21014RNA RECOGNITION MOTIF-CONTAINING
mRNA.BJAM.scaffold9941.21015SOLUTE CARRIER FAMILY 35
mRNA.BJAM.scaffold9941.21016ANAPHASE-PROMOTING COMPLEX 10
mRNA.BJAM.scaffold9945.21018SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
mRNA.BJAM.scaffold9946.21019
mRNA.BJAM.scaffold9946.21020IONOTROPIC RECEPTOR 20A-RELATED
mRNA.BJAM.scaffold9946.21021O-METHYLTRANSFERASE-RELATED
mRNA.BJAM.scaffold995.6127UNCHARACTERIZED
mRNA.BJAM.scaffold9951.21022
mRNA.BJAM.scaffold9951.21023
mRNA.BJAM.scaffold9955.21024GAMMA-SECRETASE SUBUNIT APH-1
mRNA.BJAM.scaffold9955.21025
mRNA.BJAM.scaffold9959.21026
mRNA.BJAM.scaffold996.6128PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5
mRNA.BJAM.scaffold9963.21027
mRNA.BJAM.scaffold9964.21028RIBONUCLEASE H2 SUBUNIT A
mRNA.BJAM.scaffold9966.21029RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold9967.21030
mRNA.BJAM.scaffold9969.21031VITELLOGENIN-RELATED
mRNA.BJAM.scaffold9969.21032VITELLOGENIN-RELATED
mRNA.BJAM.scaffold9969.21033VITELLOGENIN-RELATED
mRNA.BJAM.scaffold9969.21034
mRNA.BJAM.scaffold9969.21035VITELLOGENIN-RELATED
mRNA.BJAM.scaffold9969.21036
mRNA.BJAM.scaffold997.6129DNA-DIRECTED RNA POLYMERASE II, III
mRNA.BJAM.scaffold997.6130BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
mRNA.BJAM.scaffold997.6131FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED
mRNA.BJAM.scaffold997.6132
mRNA.BJAM.scaffold997.6133
mRNA.BJAM.scaffold997.6134
mRNA.BJAM.scaffold997.6135RBM25 PROTEIN
mRNA.BJAM.scaffold997.6136
mRNA.BJAM.scaffold997.6137GRPE PROTEIN
mRNA.BJAM.scaffold997.6138UNCHARACTERIZED
mRNA.BJAM.scaffold997.6139PDZ AND LIM DOMAIN PROTEIN ZASP
mRNA.BJAM.scaffold997.6140PDZ AND LIM DOMAIN PROTEIN ZASP
mRNA.BJAM.scaffold9970.21038
mRNA.BJAM.scaffold9973.21039PROTEIN STAR
mRNA.BJAM.scaffold9975.21040
mRNA.BJAM.scaffold9975.21041LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold9975.21042SERINE PROTEASE INHIBITOR, SERPIN
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