About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold9775.20918CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold9775.20919UNCHARACTERIZED
mRNA.BJAM.scaffold978.6072CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold9780.20920SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold9781.20921SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold9781.20922
mRNA.BJAM.scaffold979.6073
mRNA.BJAM.scaffold979.6074
mRNA.BJAM.scaffold979.6075
mRNA.BJAM.scaffold9790.20924RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold9795.20925
mRNA.BJAM.scaffold9798.20926MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold9799.20927RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
mRNA.BJAM.scaffold9799.20928RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
mRNA.BJAM.scaffold9799.20929PHOSPHORYLASE B KINASE REGULATORY SUBUNIT
mRNA.BJAM.scaffold98.761FMRFAMIDE RECEPTOR-RELATED
mRNA.BJAM.scaffold98.762
mRNA.BJAM.scaffold98.763
mRNA.BJAM.scaffold98.764
mRNA.BJAM.scaffold98.765
mRNA.BJAM.scaffold9806.20930BRCA1-ASSOCIATED PROTEIN
mRNA.BJAM.scaffold9806.20931PDZ DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold981.6076ACETYL-COA C-ACYLTRANSFERASE
mRNA.BJAM.scaffold981.607760S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N
mRNA.BJAM.scaffold981.607860S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N
mRNA.BJAM.scaffold981.6079T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED
mRNA.BJAM.scaffold981.6080
mRNA.BJAM.scaffold981.6081MULTIPLE COAGULATION FACTOR DEFICIENCY PROTEIN 2 NEURAL STEM CELL DERIVED NEURONAL SURVIVAL PROTEIN
mRNA.BJAM.scaffold9815.20932
mRNA.BJAM.scaffold9819.20933LYSYL OXIDASE-LIKE-RELATED
mRNA.BJAM.scaffold982.6082PHOSPHATIDYLINOSITOL GLYCAN-RELATED
mRNA.BJAM.scaffold982.6083
mRNA.BJAM.scaffold982.6084
mRNA.BJAM.scaffold982.6085UNCHARACTERIZED
mRNA.BJAM.scaffold982.6086MAP/MICROTUBULE AFFINITY-REGULATING KINASE
mRNA.BJAM.scaffold982.6087WD-40 REPEAT PROTEIN
mRNA.BJAM.scaffold9821.20934
mRNA.BJAM.scaffold9821.20935CHLORIDE CHANNEL PROTEIN 2
mRNA.BJAM.scaffold9821.20936
mRNA.BJAM.scaffold9821.20937CHLORIDE CHANNEL PROTEIN 2
mRNA.BJAM.scaffold9825.20938MELANOMA INHIBITORY ACTIVITY-RELATED
mRNA.BJAM.scaffold9827.20939IMPORTIN ALPHA
mRNA.BJAM.scaffold9828.20940NARDILYSIN
mRNA.BJAM.scaffold9828.20941NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT
mRNA.BJAM.scaffold9829.20942PHOSPHOMANNOMUTASE
mRNA.BJAM.scaffold983.6088
mRNA.BJAM.scaffold983.6089
mRNA.BJAM.scaffold983.6090UNCHARACTERIZED
mRNA.BJAM.scaffold983.6091UNCHARACTERIZED
mRNA.BJAM.scaffold983.6092UNCHARACTERIZED
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