About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold94.716TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED
mRNA.BJAM.scaffold94.717TUBULIN
mRNA.BJAM.scaffold94.718TUBULIN
mRNA.BJAM.scaffold94.719
mRNA.BJAM.scaffold94.720
mRNA.BJAM.scaffold94.721BROMODOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold94.722PROLINE OXIDASE
mRNA.BJAM.scaffold94.723PROLINE OXIDASE
mRNA.BJAM.scaffold94.724
mRNA.BJAM.scaffold94.725ADP RIBOSYLATION FACTOR-RELATED
mRNA.BJAM.scaffold94.726INNER KINETOCHORE SUBUNIT MAL2
mRNA.BJAM.scaffold94.727SODIUM/DICARBOXYLATE SYMPORTER-RELATED
mRNA.BJAM.scaffold94.728
mRNA.BJAM.scaffold94.729BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1
mRNA.BJAM.scaffold94.730MALE STERILITY PROTEIN 2-RELATED
mRNA.BJAM.scaffold94.731MALE STERILITY PROTEIN 2-RELATED
mRNA.BJAM.scaffold94.732HYALURONIC ACID-BINDING PROTEIN 4
mRNA.BJAM.scaffold94.733HYALURONIC ACID-BINDING PROTEIN 4
mRNA.BJAM.scaffold94.734ZINC FINGER PROTEIN ZIC AND GLI
mRNA.BJAM.scaffold94.735
mRNA.BJAM.scaffold94.736LUPUS LA PROTEIN-RELATED
mRNA.BJAM.scaffold94.737TRANSCRIPTION INITIATION FACTOR TFIID
mRNA.BJAM.scaffold94.738
mRNA.BJAM.scaffold94.739
mRNA.BJAM.scaffold94.740CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
mRNA.BJAM.scaffold94.741CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
mRNA.BJAM.scaffold94.742CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
mRNA.BJAM.scaffold940.5912
mRNA.BJAM.scaffold940.5913LEUCOKININ RECEPTOR-RELATED
mRNA.BJAM.scaffold940.5914WINGED HELIX DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold940.5915
mRNA.BJAM.scaffold940.5916UNCHARACTERIZED
mRNA.BJAM.scaffold9400.20714CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold9401.20715DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold9404.20716
mRNA.BJAM.scaffold9405.20717RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold9405.20718
mRNA.BJAM.scaffold9409.20719MITOCHONDRIAL RIBOSOMAL PROTEIN 63
mRNA.BJAM.scaffold9409.20720VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
mRNA.BJAM.scaffold9409.20721VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13
mRNA.BJAM.scaffold9409.20722
mRNA.BJAM.scaffold941.5917
mRNA.BJAM.scaffold941.5918
mRNA.BJAM.scaffold9411.20723
mRNA.BJAM.scaffold9412.20724CHAPERONIN
mRNA.BJAM.scaffold9415.20727
mRNA.BJAM.scaffold9415.20728ZINC/IRON TRANSPORTER
mRNA.BJAM.scaffold9418.20729SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
mRNA.BJAM.scaffold9418.20730MRNA GUANINE-7- METHYLTRANSFERASE
mRNA.BJAM.scaffold942.5919TRANSLATION FACTOR
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