About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold9358.20683-
mRNA.BJAM.scaffold9358.20684STROMAL ANTIGEN
mRNA.BJAM.scaffold9358.20685STROMAL ANTIGEN
mRNA.BJAM.scaffold9359.20686
mRNA.BJAM.scaffold9359.20687ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
mRNA.BJAM.scaffold9359.20688ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
mRNA.BJAM.scaffold936.5894ACROSIN-RELATED
mRNA.BJAM.scaffold936.5895PROBABLE MEMBRANE PROTEIN DUF221-RELATED
mRNA.BJAM.scaffold936.5896
mRNA.BJAM.scaffold936.5897CASEIN KINASE-RELATED
mRNA.BJAM.scaffold936.5898
mRNA.BJAM.scaffold936.5899
mRNA.BJAM.scaffold936.5900TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS
mRNA.BJAM.scaffold936.5901-
mRNA.BJAM.scaffold936.5902ALANYL-TRNA EDITING PROTEIN
mRNA.BJAM.scaffold936.5903FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE
mRNA.BJAM.scaffold936.5904
mRNA.BJAM.scaffold936.5905PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
mRNA.BJAM.scaffold936.5906PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
mRNA.BJAM.scaffold9363.20689IRE1-RELATED
mRNA.BJAM.scaffold937.5907ATP-DEPENDENT (S)-NAD(P)H-HYDRATE DEHYDRATASE FAMILY MEMBER
mRNA.BJAM.scaffold937.5908ATP-BINDING CASSETTE SUB-FAMILY B
mRNA.BJAM.scaffold937.5909
mRNA.BJAM.scaffold9371.20690
mRNA.BJAM.scaffold9376.20691
mRNA.BJAM.scaffold9377.20693
mRNA.BJAM.scaffold938.5910
mRNA.BJAM.scaffold938.5911
mRNA.BJAM.scaffold9380.20694
mRNA.BJAM.scaffold9380.20695
mRNA.BJAM.scaffold9380.20696TATA ELEMENT MODULATORY FACTOR TMF1
mRNA.BJAM.scaffold9381.20697ACYL-COENZYME A THIOESTERASE-RELATED
mRNA.BJAM.scaffold9385.20698
mRNA.BJAM.scaffold9385.20699MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49
mRNA.BJAM.scaffold9385.20700URIDINE PHOSPHORYLASE
mRNA.BJAM.scaffold9386.20701
mRNA.BJAM.scaffold9387.20702
mRNA.BJAM.scaffold9387.20703
mRNA.BJAM.scaffold9390.20704CHITINASE
mRNA.BJAM.scaffold9390.20705TRANSPOSABLE ELEMENT-RELATED
mRNA.BJAM.scaffold9390.20706
mRNA.BJAM.scaffold9390.20707ARFAPTIN-RELATED
mRNA.BJAM.scaffold9394.20708E3 UFM1-PROTEIN LIGASE 1
mRNA.BJAM.scaffold9395.20709WD REPEAT-CONTAINING PROTEIN 36
mRNA.BJAM.scaffold9395.20710LEUCYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold9395.20711LEUCYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold9395.20712LEUCYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold9397.20713
mRNA.BJAM.scaffold94.714PRE-MRNA SPLICING FACTOR
mRNA.BJAM.scaffold94.715PRE-MRNA SPLICING FACTOR
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