About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf9841_6.9EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3
PE_Scaf9842_0.1ACETYLGLUCOSAMINYLTRANSFERASE
PE_Scaf9844_0.0
PE_Scaf9844_0.1
PE_Scaf9844_0.12CYCLIN
PE_Scaf9844_0.14ZINC FINGER MYND DOMAIN-CONTAINING PROTEIN 15
PE_Scaf9844_0.18
PE_Scaf9844_0.19CYCLIN
PE_Scaf9844_0.3
PE_Scaf9844_0.4
PE_Scaf9845_1.5ARMADILLO-TYPE FOLD-RELATED
PE_Scaf9845_1.6
PE_Scaf9845_1.7ARMADILLO-TYPE FOLD-RELATED
PE_Scaf9847_0.5KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
PE_Scaf9847_1.2KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
PE_Scaf9847_1.7REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
PE_Scaf9853_0.0
PE_Scaf9853_1.10MRNA TURNOVER PROTEIN 4 MRTO4
PE_Scaf9853_1.3WD REPEAT-CONTAINING PROTEIN 48
PE_Scaf9853_2.2114-3-3 PROTEIN
PE_Scaf9853_2.22PIKACHURIN-LIKE PROTEIN
PE_Scaf9853_2.23PIKACHURIN-LIKE PROTEIN
PE_Scaf9853_2.24
PE_Scaf9853_4.6NOTCH LIGAND FAMILY MEMBER
PE_Scaf9853_4.7CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
PE_Scaf9853_4.8NEUROLIGIN
PE_Scaf9853_4.9NEUROLIGIN
PE_Scaf9853_5.4
PE_Scaf9853_5.9POLYCYSTIN FAMILY MEMBER
PE_Scaf9853_6.10FIBRILLIN-RELATED
PE_Scaf9853_6.9
PE_Scaf9854_2.3SH3 DOMAIN-CONTAINING
PE_Scaf9854_3.5MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN
PE_Scaf9854_3.6PUTATIVE-RELATED
PE_Scaf9856_0.0
PE_Scaf9856_0.8
PE_Scaf9856_0.9
PE_Scaf9859_0.0
PE_Scaf9859_0.1
PE_Scaf9859_0.5NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf9861_0.0
PE_Scaf9864_0.0
PE_Scaf9865_0.4D-DOPACHROME DECARBOXYLASE
PE_Scaf9865_1.10
PE_Scaf9865_1.8
PE_Scaf9865_3.0
PE_Scaf9865_3.1
PE_Scaf9865_3.10
PE_Scaf9865_3.2
PE_Scaf9865_3.7SYNAPTIC VESICLE GLYCOPROTEIN 2
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