The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g8807 | |
| MBSQW58_g8808 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| MBSQW58_g8809 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| MBSQW58_g881 | DNA LIGASE 1/3 FAMILY MEMBER |
| MBSQW58_g8810 | EPM2A-INTERACTING PROTEIN 1 |
| MBSQW58_g8811 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| MBSQW58_g8812 | - |
| MBSQW58_g8813 | SER/THR-RICH PROTEIN T10 IN DGCR REGION |
| MBSQW58_g8814 | NADH-UBIQUINONE OXIDOREDUCTASE 39 KDA SUBUNIT-RELATED |
| MBSQW58_g8815 | |
| MBSQW58_g8816 | |
| MBSQW58_g8817 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| MBSQW58_g8818 | DISCS LARGE |
| MBSQW58_g8819 | |
| MBSQW58_g882 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| MBSQW58_g8820 | DISCS LARGE |
| MBSQW58_g8821 | |
| MBSQW58_g8822 | DISCS LARGE |
| MBSQW58_g8823 | |
| MBSQW58_g8824 | PAIRED MESODERM HOMEOBOX PROTEIN 1-RELATED |
| MBSQW58_g8825 | |
| MBSQW58_g8826 | |
| MBSQW58_g8827 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g8828 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| MBSQW58_g8829 | CASEIN KINASE II SUBUNIT BETA |
| MBSQW58_g883 | |
| MBSQW58_g8830 | GLYCEROL-3-PHOSPHATE DEHYDROGENASE |
| MBSQW58_g8831 | ACID PHOSPHATASE-RELATED |
| MBSQW58_g8832 | |
| MBSQW58_g8833 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| MBSQW58_g8834 | |
| MBSQW58_g8835 | |
| MBSQW58_g8836 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| MBSQW58_g8837 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| MBSQW58_g8838 | NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING |
| MBSQW58_g8839 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| MBSQW58_g884 | ORGANIC SOLUTE TRANSPORTER-RELATED |
| MBSQW58_g8840 | REVERSE TRANSCRIPTASES |
| MBSQW58_g8841 | |
| MBSQW58_g8842 | |
| MBSQW58_g8843 | SERINE PROTEASE |
| MBSQW58_g8844 | METHYLTRANSFERASE, FKBM FAMILY PROTEIN |
| MBSQW58_g8845 | |
| MBSQW58_g8846 | LD33804P |
| MBSQW58_g8847 | RIBOFLAVIN TRANSPORTER RIBJ |
| MBSQW58_g8848 | REVERSE TRANSCRIPTASES |
| MBSQW58_g8849 | |
| MBSQW58_g885 | ET TRANSLATION PRODUCT-RELATED |
| MBSQW58_g8850 | CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR |
| MBSQW58_g8851 |
