About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf9555_1.29-
PE_Scaf9555_1.9-
PE_Scaf9557_0.0
PE_Scaf9558_0.10
PE_Scaf9558_0.12SMALL INTEGRAL MEMBRANE PROTEIN 12
PE_Scaf9558_0.8PA-PL1 PHOSPHOLIPASE FAMILY
PE_Scaf9560_0.0
PE_Scaf9560_0.7SIDEROFLEXIN
PE_Scaf9563_1.1
PE_Scaf9563_1.3
PE_Scaf9563_3.1LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf9563_4.12SI:CH211-108C17.2-RELATED-RELATED
PE_Scaf9563_4.13TETRATRICOPEPTIDE REPEAT PROTEIN 38
PE_Scaf9563_4.14LD33804P
PE_Scaf9564_0.1
PE_Scaf9564_1.5
PE_Scaf9564_2.1CENTROMERE PROTEIN H
PE_Scaf9564_3.0
PE_Scaf9566_1.3
PE_Scaf9566_3.4
PE_Scaf9566_5.1CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
PE_Scaf9566_5.3CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
PE_Scaf9566_6.0
PE_Scaf9571_0.0
PE_Scaf9571_0.1
PE_Scaf9571_0.3
PE_Scaf9573_0.0
PE_Scaf9573_0.1
PE_Scaf9573_0.3
PE_Scaf9574_0.4PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
PE_Scaf9575_1.6
PE_Scaf9575_1.7
PE_Scaf9576_0.1
PE_Scaf9576_0.4UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
PE_Scaf9576_0.5STEROL ISOMERASE
PE_Scaf9579_0.0
PE_Scaf9579_0.1
PE_Scaf957_1.2GOLGI MEMBRANE PROTEIN YIP1
PE_Scaf957_1.3GOLGI MEMBRANE PROTEIN YIP1
PE_Scaf957_2.4PROTEIN ARGININE N-METHYLTRANSFERASE
PE_Scaf957_3.5CADHERIN-23
PE_Scaf957_3.6DESMOGLEIN FAMILY MEMBER
PE_Scaf9580_0.1
PE_Scaf9580_0.12ALDEHYDE DEHYDROGENASE
PE_Scaf9580_0.3
PE_Scaf9584_0.0
PE_Scaf9584_1.0
PE_Scaf9584_2.0
PE_Scaf9584_2.5
PE_Scaf9585_0.2
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