The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032889371.1 | 1,4-ALPHA-GLUCAN-BRANCHING ENZYME |
| XP_032889372.1 | WD40 REPEAT PROTEIN |
| XP_032889373.1 | EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 |
| XP_032889374.1 | PYRIDOXAL KINASE |
| XP_032889375.1 | LYSOZYME C |
| XP_032889376.1 | LYSOZYME C |
| XP_032889377.1 | LYSOZYME C |
| XP_032889378.1 | B-BOX DOMAIN CONTAINING |
| XP_032889379.1 | SMAD |
| XP_032889380.1 | LYSOZYME C |
| XP_032889381.1 | CHONDROLECTIN VARIANT CHODLFDELTAE. |
| XP_032889382.1 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY E MEMBER 1, 3 |
| XP_032889383.1 | ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. |
| XP_032889384.1 | BASIGIN RELATED |
| XP_032889385.1 | ACROSIN-RELATED |
| XP_032889386.1 | TENASCIN |
| XP_032889387.1 | SMAD |
| XP_032889388.1 | GLUTAREDOXIN |
| XP_032889389.1 | T-BOX PROTEIN-RELATED |
| XP_032889390.1 | HISTONE H4 |
| XP_032889391.1 | INTERPHOTORECEPTOR MATRIX PROTEOGLYCAN |
| XP_032889392.1 | UNCHARACTERIZED |
| XP_032889393.1 | SERINE/THREONINE PROTEIN KINASE |
| XP_032889394.1 | ADHESION G-PROTEIN COUPLED RECEPTOR |
| XP_032889395.1 | CLAUDIN |
| XP_032889396.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032889397.1 | |
| XP_032889398.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032889399.1 | PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032889400.1 | - |
| XP_032889401.1 | MICROTUBULE-ASSOCIATED PROTEIN |
| XP_032889402.1 | COAGULATION FACTOR |
| XP_032889403.1 | |
| XP_032889404.1 | ZINC PHOSPHODIESTERASE ELAC PROTEIN 1 |
| XP_032889405.1 | FAM124 DOMAIN-CONTAINING PROTEIN-RELATED |
| XP_032889406.1 | MALIC ENZYME-RELATED |
| XP_032889407.1 | COLLECTRIN |
| XP_032889408.1 | SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT |
| XP_032889409.1 | CELL SURFACE GLYCOPROTEIN OX2 RECEPTOR PRECURSOR |
| XP_032889410.1 | RCG36411 |
| XP_032889411.1 | LD33804P |
| XP_032889412.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| XP_032889413.1 | TOLL-LIKE RECEPTOR 7-RELATED |
| XP_032889414.1 | TOLL-LIKE RECEPTOR |
| XP_032889415.1 | SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1 |
| XP_032889416.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032889417.1 | THAP DOMAIN-CONTAINING |
| XP_032889418.1 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| XP_032889419.1 | |
| XP_032889420.1 | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 |
