The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032889221.1 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
| XP_032889222.1 | GDOWN1 |
| XP_032889223.1 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
| XP_032889224.1 | TOLL-LIKE RECEPTOR 7-RELATED |
| XP_032889225.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| XP_032889226.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| XP_032889227.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032889228.1 | GDOWN1 |
| XP_032889229.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032889230.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032889231.1 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| XP_032889232.1 | RAB FAMILY |
| XP_032889233.1 | RAB FAMILY |
| XP_032889234.1 | RAB FAMILY |
| XP_032889235.1 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 |
| XP_032889236.1 | ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG |
| XP_032889237.1 | ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG |
| XP_032889238.1 | ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG |
| XP_032889239.1 | MYELIN PROTEOLIPID |
| XP_032889240.1 | MYELIN PROTEOLIPID |
| XP_032889241.1 | MYELIN PROTEOLIPID |
| XP_032889242.1 | RAS-RELATED PROTEIN RAB |
| XP_032889243.1 | MYELIN PROTEOLIPID |
| XP_032889244.1 | GEM-ASSOCIATED PROTEIN 8 |
| XP_032889245.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032889246.1 | FANCONI ANEMIA GROUP B PROTEIN |
| XP_032889247.1 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 2 |
| XP_032889248.1 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 2 |
| XP_032889249.1 | NXPE FAMILY MEMBER |
| XP_032889250.1 | NXPE FAMILY MEMBER |
| XP_032889251.1 | RAS-RELATED PROTEIN RAB |
| XP_032889252.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032889253.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032889254.1 | RING FINGER PROTEIN 214 |
| XP_032889255.1 | RING FINGER PROTEIN 214 |
| XP_032889256.1 | NEPHRIN |
| XP_032889257.1 | CBL |
| XP_032889258.1 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| XP_032889259.1 | HMG-BOX TRANSCRIPTION FACTOR BBX |
| XP_032889260.1 | BUTYROPHILIN |
| XP_032889261.1 | LUNG ADENOMA SUSCEPTIBILITY PROTEIN 2 |
| XP_032889262.1 | PROTEIN CIP2A |
| XP_032889263.1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| XP_032889264.1 | LUNG ADENOMA SUSCEPTIBILITY PROTEIN 2 |
| XP_032889265.1 | |
| XP_032889266.1 | |
| XP_032889267.1 | |
| XP_032889268.1 | TPA-INDUCED TRANSMEMBRANE PROTEIN |
| XP_032889269.1 | |
| XP_032889270.1 | CALPONIN |
