About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf9008_1.4NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf9008_2.1PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
PE_Scaf900_1.6
PE_Scaf900_1.7
PE_Scaf9010_0.7MYOSIN
PE_Scaf9014_0.0
PE_Scaf9015_0.0
PE_Scaf9015_0.3TYROSINE-PROTEIN KINASE
PE_Scaf9015_0.4TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf9015_1.1
PE_Scaf9015_2.14RE38146P
PE_Scaf9015_2.7B-BOX DOMAIN CONTAINING
PE_Scaf9017_0.0
PE_Scaf9017_0.1
PE_Scaf9020_0.1
PE_Scaf9020_0.4CRUMBS FAMILY MEMBER
PE_Scaf9020_1.3IRE1-RELATED
PE_Scaf9020_1.4
PE_Scaf9021_0.11
PE_Scaf9021_0.12NUCLEAR PROTEIN MDM1
PE_Scaf9021_0.1330S RIBOSOMAL PROTEIN S12 FAMILY MEMBER
PE_Scaf9021_0.14VACUOLAR ATP SYNTHASE SUBUNIT S1
PE_Scaf9021_0.4SULFATE TRANSPORTER
PE_Scaf9022_1.0
PE_Scaf9022_1.4
PE_Scaf9022_1.6
PE_Scaf9023_0.1
PE_Scaf9023_0.4ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
PE_Scaf9023_0.5
PE_Scaf9024_0.2TOLL-LIKE RECEPTOR
PE_Scaf9024_0.4MITOCHONDRIA-EATING PROTEIN-RELATED
PE_Scaf9024_1.7
PE_Scaf9025_0.0
PE_Scaf9025_0.1
PE_Scaf9025_0.2
PE_Scaf9029_0.2BETA-MANNOSIDASE
PE_Scaf9029_1.1
PE_Scaf9029_1.6COATOMER
PE_Scaf902_0.2LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf9030_0.0
PE_Scaf9030_0.1
PE_Scaf9030_0.3RASSF
PE_Scaf9032_0.8DEDICATOR OF CYTOKINESIS
PE_Scaf9032_0.9PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
PE_Scaf9033_0.3
PE_Scaf9035_0.3
PE_Scaf9039_1.3RAN GTPASE-ACTIVATING PROTEIN 1
PE_Scaf903_0.0
PE_Scaf9040_0.1
PE_Scaf9040_0.2
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