About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf8752_2.5
PE_Scaf8752_2.6SNF2/RAD54 FAMILY MEMBER
PE_Scaf8755_0.3
PE_Scaf8755_1.0
PE_Scaf8755_1.6IONOTROPIC GLUTAMATE RECEPTOR
PE_Scaf8756_0.3
PE_Scaf8759_1.1MIP08469P
PE_Scaf8759_1.3MIP08469P
PE_Scaf8759_2.1SPARC OSTEONECTIN
PE_Scaf875_0.7SODIUM/HYDROGEN EXCHANGER
PE_Scaf8760_0.2STRIATIN
PE_Scaf8761_0.0
PE_Scaf8761_0.1
PE_Scaf8761_0.4
PE_Scaf8763_1.6ZINC FINGER PROTEIN
PE_Scaf8764_0.2LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf8767_0.0
PE_Scaf8767_7.10CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
PE_Scaf8767_7.13
PE_Scaf8768_0.0
PE_Scaf8770_0.3GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN
PE_Scaf8770_1.4F-BOX ONLY PROTEIN 5 AND 43
PE_Scaf8770_1.5EXOCYST COMPLEX COMPONENT SEC6-RELATED
PE_Scaf8770_2.2
PE_Scaf8770_3.0
PE_Scaf8770_3.1
PE_Scaf8770_3.13ACTIVATOR OF BASAL TRANSCRIPTION 1
PE_Scaf8770_3.14KYNURENINASE
PE_Scaf8770_3.15GLR0591 PROTEIN
PE_Scaf8770_3.7
PE_Scaf8771_0.0
PE_Scaf8771_0.1
PE_Scaf8774_0.3
PE_Scaf8775_0.1MYOSIN LIGHT CHAIN 1, 3
PE_Scaf8775_0.2ZINC FINGER PROTEIN
PE_Scaf8778_0.3SPERM-ASSOCIATED ANTIGEN 8
PE_Scaf8780_0.3
PE_Scaf8782_0.4HOMEOBOX PROTEIN ABDOMINAL-B
PE_Scaf8782_0.5GLYCEROL-3-PHOSPHATE DEHYDROGENASE
PE_Scaf8795_0.11
PE_Scaf8795_0.7
PE_Scaf8795_0.8
PE_Scaf8795_1.17
PE_Scaf8795_1.18
PE_Scaf8795_1.20
PE_Scaf8795_1.21
PE_Scaf8795_1.9
PE_Scaf8796_0.4
PE_Scaf8796_0.5DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED
PE_Scaf8796_0.6RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN
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