About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf8632_1.0
PE_Scaf8632_1.1
PE_Scaf8633_1.0
PE_Scaf8633_1.2
PE_Scaf8633_1.6
PE_Scaf8633_1.7
PE_Scaf8633_10.0
PE_Scaf8633_10.4USP DOMAIN-CONTAINING PROTEIN
PE_Scaf8633_3.0
PE_Scaf8633_4.1
PE_Scaf8633_5.2NG5
PE_Scaf8633_6.2-
PE_Scaf8633_8.1NG5
PE_Scaf8633_9.0
PE_Scaf8633_9.7SI:CH211-108C17.2-RELATED-RELATED
PE_Scaf8633_9.9NG5
PE_Scaf8634_0.5
PE_Scaf8634_0.7
PE_Scaf8635_1.2
PE_Scaf8635_1.3
PE_Scaf8635_5.1
PE_Scaf8635_5.7
PE_Scaf8635_5.8NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf8635_6.2NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf8635_6.3NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf8637_0.2TOLL-LIKE RECEPTOR
PE_Scaf8637_1.3NUCLEOLAR RNA-ASSOCIATED PROTEIN
PE_Scaf8637_2.10
PE_Scaf8637_2.7PANTOTHENATE KINASE
PE_Scaf8638_1.3BCDNA.GH03377
PE_Scaf8638_1.4ADENOMATOSIS POLYPOSIS COLI DOWN-REGULATED 1
PE_Scaf8638_2.1E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
PE_Scaf8638_2.2
PE_Scaf8638_2.5CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 10
PE_Scaf8638_3.3ACROSIN-RELATED
PE_Scaf8638_3.4EXPRESSED PROTEIN
PE_Scaf8639_0.4TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
PE_Scaf8640_0.0
PE_Scaf8640_0.1
PE_Scaf8640_0.5
PE_Scaf8642_0.630S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR
PE_Scaf8642_1.2
PE_Scaf8642_1.6GEM-ASSOCIATED PROTEIN 4
PE_Scaf8642_1.9
PE_Scaf8642_10.5LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf8642_10.6RIBONUCLEASE P_MRP PROTEIN SUBUNIT POP5
PE_Scaf8642_2.18-OXOGUANINE DNA GLYCOSYLASE
PE_Scaf8642_3.29TUBULIN
PE_Scaf8642_3.30TUBULIN
PE_Scaf8642_3.6LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3
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