The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032887771.1 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| XP_032887772.1 | CELL ADHESION MOLECULE |
| XP_032887773.1 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| XP_032887774.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032887775.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032887776.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032887777.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032887778.1 | ZINC FINGER PROTEIN ZIC AND GLI |
| XP_032887779.1 | GLYCOSIDASE FAMILY 31 |
| XP_032887780.1 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| XP_032887781.1 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| XP_032887782.1 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| XP_032887783.1 | PHOSPHOLIPID SCRAMBLASE-RELATED |
| XP_032887784.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| XP_032887785.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| XP_032887786.1 | GLYCOSIDASE FAMILY 31 |
| XP_032887787.1 | GH11358P |
| XP_032887788.1 | GH11358P |
| XP_032887789.1 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
| XP_032887790.1 | CARBOHYDRATE SULFOTRANSFERASE |
| XP_032887791.1 | RNA PROCESSING PROTEIN LD23810P |
| XP_032887792.1 | RNA PROCESSING PROTEIN LD23810P |
| XP_032887793.1 | OVOCHYMASE-RELATED |
| XP_032887794.1 | OVOCHYMASE-RELATED |
| XP_032887795.1 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| XP_032887796.1 | FIMBRIN/PLASTIN |
| XP_032887797.1 | ORGANIC SOLUTE TRANSPORTER SUBUNIT BETA-RELATED |
| XP_032887798.1 | FIMBRIN/PLASTIN |
| XP_032887799.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| XP_032887800.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| XP_032887801.1 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| XP_032887802.1 | 5'->3' EXORIBONUCLEASE |
| XP_032887803.1 | SUGAR KINASE |
| XP_032887804.1 | TRANSCRIPTION FACTOR DP |
| XP_032887805.1 | TRANSCRIPTION FACTOR DP |
| XP_032887806.1 | TRANSCRIPTION FACTOR DP |
| XP_032887807.1 | TRANSCRIPTION FACTOR DP |
| XP_032887808.1 | TRANSCRIPTION FACTOR DP |
| XP_032887809.1 | TRANSCRIPTION FACTOR DP |
| XP_032887810.1 | SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT |
| XP_032887811.1 | RING BOX |
| XP_032887812.1 | |
| XP_032887813.1 | PTB-CONTAINING, CUBILIN AND LRP1-INTERACTING PROTEIN |
| XP_032887814.1 | PTB-CONTAINING, CUBILIN AND LRP1-INTERACTING PROTEIN |
| XP_032887815.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| XP_032887816.1 | KINESIN-RELATED PROTEIN 6 |
| XP_032887817.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
| XP_032887818.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
| XP_032887819.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
| XP_032887820.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIP12 |
