The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032887721.1 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
| XP_032887722.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 |
| XP_032887723.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 12 |
| XP_032887724.1 | TRANS-GOLGI PROTEIN GMX33 |
| XP_032887725.1 | P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032887726.1 | P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032887727.1 | P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032887728.1 | P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032887729.1 | P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032887730.1 | P2Y PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032887731.1 | CLARIN |
| XP_032887732.1 | UNCHARACTERIZED |
| XP_032887733.1 | UNCHARACTERIZED |
| XP_032887734.1 | E3 UBIQUITIN-PROTEIN LIGASE SIAH2 |
| XP_032887735.1 | SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20 |
| XP_032887736.1 | SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20 |
| XP_032887737.1 | SIMILAR TO CHROMOSOME 3 OPEN READING FRAME 20 |
| XP_032887738.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2A |
| XP_032887739.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2A |
| XP_032887740.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2A |
| XP_032887741.1 | SELENOPROTEIN T |
| XP_032887742.1 | STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 |
| XP_032887743.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032887744.1 | STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 |
| XP_032887745.1 | TSC22 DOMAIN FAMILY PROTEIN 2 |
| XP_032887746.1 | PROFILIN |
| XP_032887747.1 | RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED |
| XP_032887748.1 | RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED |
| XP_032887749.1 | COMM DOMAIN CONTAINING PROTEIN 2 |
| XP_032887750.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032887751.1 | COMM DOMAIN CONTAINING PROTEIN 2 |
| XP_032887752.1 | YES-ASSOCIATED PROTEIN YAP1 FAMILY MEMBER |
| XP_032887753.1 | TRANSMEMBRANE 4 L6 FAMILY MEMBER 1-RELATED |
| XP_032887754.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| XP_032887755.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| XP_032887756.1 | TRANSMEMBRANE 4 L6 FAMILY MEMBER 1-RELATED |
| XP_032887757.1 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN |
| XP_032887758.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032887759.1 | HERMANSKY-PUDLAK SYNDROME 3 PROTEIN |
| XP_032887760.1 | HERMANSKY-PUDLAK SYNDROME 3 PROTEIN |
| XP_032887761.1 | HERMANSKY-PUDLAK SYNDROME 3 PROTEIN |
| XP_032887762.1 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
| XP_032887763.1 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
| XP_032887764.1 | TRANSCRIPTION TERMINATION FACTOR 2-RELATED |
| XP_032887765.1 | INTIMAL THICKNESS RECEPTOR-RELATED |
| XP_032887766.1 | INTIMAL THICKNESS RECEPTOR-RELATED |
| XP_032887767.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032887768.1 | GLYCOGENIN SUBFAMILY MEMBER |
| XP_032887769.1 | GLYCOGENIN SUBFAMILY MEMBER |
| XP_032887770.1 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
