Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00191510 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00191520 | FOS TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00191530 | FOS TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00191540 | FOS TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00191550 | FOS TRANSCRIPTION FACTOR-RELATED |
| SKAU_T00191560 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
| SKAU_T00191570 | MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED |
| SKAU_T00191580 | |
| SKAU_T00191590 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00191600 | TGF-BETA FAMILY |
| SKAU_T00191610 | |
| SKAU_T00191620 | KNIRPS-RELATED PROTEIN-RELATED |
| SKAU_T00191630 | YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP |
| SKAU_T00191640 | HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26 |
| SKAU_T00191650 | DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED |
| SKAU_T00191660 | |
| SKAU_T00191670 | |
| SKAU_T00191680 | |
| SKAU_T00191690 | N-ALPHA-ACETYLTRANSFERASE 30 |
| SKAU_T00191700 | FULL-LENGTH CDNA CLONE CS0DC025YL05 OF NEUROBLASTOMA |
| SKAU_T00191710 | ACTIN |
| SKAU_T00191720 | |
| SKAU_T00191730 | VASCULAR ENDOTHELIAL GROWTH FACTOR |
| SKAU_T00191740 | CLOCK-INTERACTING PACEMAKER |
| SKAU_T00191750 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| SKAU_T00191760 | STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 15 |
| SKAU_T00191770 | HOMEOBOX PROTEIN SIX |
| SKAU_T00191780 | HOMEOBOX PROTEIN SIX |
| SKAU_T00191790 | HOMEOBOX PROTEIN SIX |
| SKAU_T00191800 | RETROTRANSPOSON |
| SKAU_T00191810 | |
| SKAU_T00191820 | PROTEIN PHOSPHATASE |
| SKAU_T00191830 | RETICULON-LIKE PROTEIN |
| SKAU_T00191840 | RETICULON-LIKE PROTEIN |
| SKAU_T00191850 | MITOCHONDRIAL PROTEOLIPID |
| SKAU_T00191860 | APOPTOSIS-STIMULATING OF P53 PROTEIN |
| SKAU_T00191870 | FORMIN HOMOLOGY 2 FAMILY MEMBER |
| SKAU_T00191880 | |
| SKAU_T00191890 | TRANS-3-HYDROXY-L-PROLINE DEHYDRATASE |
| SKAU_T00191900 | |
| SKAU_T00191910 | |
| SKAU_T00191920 | CONTACTIN 5 |
| SKAU_T00191930 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00191940 | |
| SKAU_T00191950 | HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED |
| SKAU_T00191960 | |
| SKAU_T00191970 | |
| SKAU_T00191980 | 40S RIBOSOMAL PROTEIN S29 |
| SKAU_T00191990 | |
| SKAU_T00192000 |
