Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00189010 | |
| SKAU_T00189020 | |
| SKAU_T00189030 | LYSOZYME G FAMILY MEMBER |
| SKAU_T00189040 | LYSOZYME G FAMILY MEMBER |
| SKAU_T00189050 | FORKHEAD BOX PROTEIN |
| SKAU_T00189060 | PROTEIN CEBPZOS |
| SKAU_T00189070 | CCAAT-BINDING FACTOR-RELATED |
| SKAU_T00189080 | PROTEIN KINASE C, MU |
| SKAU_T00189090 | |
| SKAU_T00189100 | SESQUIPEDALIAN |
| SKAU_T00189110 | CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS |
| SKAU_T00189120 | CONNECTOR ENCHANCER OF KINASE SUPPRESSOR OF RAS |
| SKAU_T00189130 | RNA PROCESSING PROTEIN LD23810P |
| SKAU_T00189140 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
| SKAU_T00189150 | CLAUDIN |
| SKAU_T00189160 | |
| SKAU_T00189170 | |
| SKAU_T00189180 | |
| SKAU_T00189190 | BRG-1 ASSOCIATED FACTOR 250 BAF250 |
| SKAU_T00189200 | TRANSMEMBRANE PROTEIN 242 |
| SKAU_T00189210 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| SKAU_T00189220 | SI:CH211-108C17.2-RELATED-RELATED |
| SKAU_T00189230 | GALECTIN |
| SKAU_T00189240 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
| SKAU_T00189250 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00189260 | TRANSCRIPTION FACTOR CP2 |
| SKAU_T00189270 | TATA BOX-BINDING PROTEIN-ASSOCIATED FACTOR RNA POLYMERASE I SUBUNIT B |
| SKAU_T00189280 | 14-3-3 PROTEIN |
| SKAU_T00189290 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| SKAU_T00189300 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER |
| SKAU_T00189310 | INTEGRIN BETA-1-BINDING PROTEIN 1 |
| SKAU_T00189320 | ASAP FAMILY MEMBER |
| SKAU_T00189330 | TRANSCRIPTION FACTOR E2F |
| SKAU_T00189340 | PORCUPINE |
| SKAU_T00189350 | KINASE D-INTERACTING SUBSTRATE OF 220 KDA |
| SKAU_T00189360 | DNA-BINDING PROTEIN INHIBITOR |
| SKAU_T00189370 | |
| SKAU_T00189380 | |
| SKAU_T00189390 | |
| SKAU_T00189400 | |
| SKAU_T00189410 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| SKAU_T00189420 | |
| SKAU_T00189430 | |
| SKAU_T00189440 | |
| SKAU_T00189450 | |
| SKAU_T00189460 | |
| SKAU_T00189470 | |
| SKAU_T00189480 | SOX TRANSCRIPTION FACTOR |
| SKAU_T00189490 | |
| SKAU_T00189500 |
