The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032887071.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER |
| XP_032887072.1 | NONSENSE-MEDIATED MRNA DECAY PROTEIN 3 |
| XP_032887073.1 | PROTEIN PHOSPHATASE |
| XP_032887074.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032887075.1 | SERINE PALMITOYLTRANSFERASE SMALL SUBUNIT B |
| XP_032887076.1 | SERINE PALMITOYLTRANSFERASE SMALL SUBUNIT B |
| XP_032887077.1 | SERINE PALMITOYLTRANSFERASE SMALL SUBUNIT B |
| XP_032887078.1 | SERINE PALMITOYLTRANSFERASE SMALL SUBUNIT B |
| XP_032887079.1 | SERINE PALMITOYLTRANSFERASE SMALL SUBUNIT B |
| XP_032887080.1 | SERINE PALMITOYLTRANSFERASE SMALL SUBUNIT B |
| XP_032887081.1 | SERINE PALMITOYLTRANSFERASE SMALL SUBUNIT B |
| XP_032887082.1 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| XP_032887083.1 | UREA TRANSPORTER |
| XP_032887084.1 | ALPHA-GLUCOSIDASE |
| XP_032887085.1 | SLIT AND NTRK-LIKE PROTEIN 4-RELATED |
| XP_032887086.1 | ACETYLCHOLINESTERASE |
| XP_032887087.1 | ACETYLCHOLINESTERASE |
| XP_032887088.1 | ACETYLCHOLINESTERASE |
| XP_032887089.1 | TF-1 CELL APOPTOSIS RELATED PROTEIN-15 |
| XP_032887090.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032887091.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032887092.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032887093.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032887094.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| XP_032887095.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| XP_032887096.1 | ALDO/KETO REDUCTASE |
| XP_032887097.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
| XP_032887098.1 | GOLGI INTEGRAL MEMBRANE PROTEIN 4 |
| XP_032887099.1 | GOLGI INTEGRAL MEMBRANE PROTEIN 4 |
| XP_032887100.1 | GOLGI INTEGRAL MEMBRANE PROTEIN 4 |
| XP_032887101.1 | SEVEN TRANSMEMBRANE PROTEIN 1-RELATED |
| XP_032887102.1 | SEVEN TRANSMEMBRANE PROTEIN 1-RELATED |
| XP_032887103.1 | VEPH-A/MELTED |
| XP_032887104.1 | VEPH-A/MELTED |
| XP_032887105.1 | ALDO/KETO REDUCTASE |
| XP_032887106.1 | VEPH-A/MELTED |
| XP_032887107.1 | VEPH-A/MELTED |
| XP_032887108.1 | VEPH-A/MELTED |
| XP_032887109.1 | VEPH-A/MELTED |
| XP_032887110.1 | VEPH-A/MELTED |
| XP_032887111.1 | VEPH-A/MELTED |
| XP_032887112.1 | VEPH-A/MELTED |
| XP_032887113.1 | VEPH-A/MELTED |
| XP_032887114.1 | VEPH-A/MELTED |
| XP_032887115.1 | PENTRAXIN-RELATED PROTEIN PTX3 |
| XP_032887116.1 | ALDO/KETO REDUCTASE |
| XP_032887117.1 | CYCLIN |
| XP_032887118.1 | LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1 |
| XP_032887119.1 | POLY [ADP-RIBOSE] POLYMERASE |
| XP_032887120.1 | POLY [ADP-RIBOSE] POLYMERASE |
