The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032886971.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032886972.1 | |
| XP_032886973.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032886974.1 | RUN AND SH3 DOMAIN CONTAINING |
| XP_032886975.1 | |
| XP_032886976.1 | INTEGRAL TRANSMEMBRANE PROTEIN 2 |
| XP_032886977.1 | CALCIUM-BINDING PROTEIN 39-RELATED |
| XP_032886978.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| XP_032886979.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| XP_032886980.1 | PERIOD CIRCADIAN PROTEIN |
| XP_032886981.1 | SYNAPTOBREVIN FAMILY MEMBER |
| XP_032886982.1 | CALSYNTENIN |
| XP_032886983.1 | FATTY ACID BINDING PROTEIN |
| XP_032886984.1 | FATTY ACID BINDING PROTEIN |
| XP_032886985.1 | ECTOPIC P GRANULES PROTEIN 5 HOMOLOG |
| XP_032886986.1 | FATTY ACID BINDING PROTEIN |
| XP_032886987.1 | COATOMER |
| XP_032886988.1 | COATOMER |
| XP_032886989.1 | COATOMER |
| XP_032886990.1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S22 |
| XP_032886991.1 | FORKHEAD BOX PROTEIN |
| XP_032886992.1 | PHOSPHATIDYLINOSITOL KINASE |
| XP_032886993.1 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| XP_032886994.1 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| XP_032886995.1 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| XP_032886996.1 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| XP_032886997.1 | PHOSPHATIDYLINOSITOL GLYCAN |
| XP_032886998.1 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| XP_032886999.1 | MITOCHONDRIAL CARRIER PROTEIN RIM2 |
| XP_032887000.1 | MITOCHONDRIAL CARRIER PROTEIN RIM2 |
| XP_032887001.1 | ACID PHOSPHATASE-RELATED |
| XP_032887002.1 | ACID PHOSPHATASE-RELATED |
| XP_032887003.1 | ACID PHOSPHATASE-RELATED |
| XP_032887004.1 | ACID PHOSPHATASE-RELATED |
| XP_032887005.1 | ACID PHOSPHATASE-RELATED |
| XP_032887006.1 | EPH RECEPTOR A5 |
| XP_032887007.1 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| XP_032887008.1 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| XP_032887009.1 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| XP_032887010.1 | UNCHARACTERIZED |
| XP_032887011.1 | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE |
| XP_032887012.1 | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE |
| XP_032887013.1 | SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE |
| XP_032887014.1 | AAA-FAMILY ATPASE |
| XP_032887015.1 | PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 |
| XP_032887016.1 | DIACYLGLYCEROL O-ACYLTRANSFERASE |
| XP_032887017.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| XP_032887018.1 | TRANSMEMBRANE PROTEIN 144 |
| XP_032887019.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| XP_032887020.1 | SECRETOGRANIN II |
