About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf797_0.7COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
PE_Scaf7981_0.0
PE_Scaf7982_0.4
PE_Scaf7982_0.5
PE_Scaf7986_2.2
PE_Scaf7986_3.10
PE_Scaf7986_3.8
PE_Scaf7986_4.0
PE_Scaf7986_4.1
PE_Scaf7989_1.3SPLICING FACTOR SF3A-RELATED
PE_Scaf7989_1.4HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
PE_Scaf7996_0.1
PE_Scaf7998_0.0
PE_Scaf7998_0.2
PE_Scaf79_0.0
PE_Scaf8001_0.4SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
PE_Scaf8001_1.4METALLOPROTEASE TLDD
PE_Scaf8001_2.3PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE
PE_Scaf8001_2.6WOLFRAMIN
PE_Scaf8002_0.4UNCHARACTERIZED
PE_Scaf8003_0.5MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
PE_Scaf8003_0.7VILLIN
PE_Scaf8003_1.1
PE_Scaf8003_1.4MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
PE_Scaf8003_1.5C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
PE_Scaf8006_0.3UNCHARACTERIZED
PE_Scaf8006_1.14UNCHARACTERIZED
PE_Scaf8006_1.18FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PE_Scaf8006_1.2PERILIPIN
PE_Scaf8006_1.7UNCHARACTERIZED
PE_Scaf8006_10.1
PE_Scaf8006_10.5
PE_Scaf8006_2.3BETA-HEXOSAMINIDASE
PE_Scaf8006_3.2
PE_Scaf8006_7.8L-CYSTEINE DESULFHYDRASE
PE_Scaf8006_8.4
PE_Scaf8006_8.6
PE_Scaf8007_0.3
PE_Scaf8008_0.0
PE_Scaf8008_0.1
PE_Scaf8008_0.5
PE_Scaf8009_1.4HISTONE H1
PE_Scaf8009_1.5HISTONE H1
PE_Scaf8009_1.6FLAP ENDONUCLEASE FAMILY MEMBER
PE_Scaf8009_1.7PHOSPHORYLATED CTD INTERACTING FACTOR 1
PE_Scaf8009_2.2HISTONE H2B
PE_Scaf8009_2.7
PE_Scaf8009_3.12POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
PE_Scaf8009_3.6HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER
PE_Scaf800_0.0
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