The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g5387 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g5388 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g5389 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g539 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| MBSQW58_g5390 | TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g5391 | CADHERIN-87A |
| MBSQW58_g5392 | CADHERIN-23 |
| MBSQW58_g5393 | |
| MBSQW58_g5394 | CADHERIN-87A |
| MBSQW58_g5395 | |
| MBSQW58_g5396 | NON-HOMOLOGOUS END-JOINING FACTOR 1 |
| MBSQW58_g5397 | CADHERIN-23 |
| MBSQW58_g5398 | PLASMINOGEN-RELATED |
| MBSQW58_g5399 | |
| MBSQW58_g54 | |
| MBSQW58_g540 | |
| MBSQW58_g5400 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| MBSQW58_g5401 | ZINC FINGER PROTEIN |
| MBSQW58_g5402 | |
| MBSQW58_g5403 | VOLTAGE-GATED POTASSIUM CHANNEL |
| MBSQW58_g5404 | |
| MBSQW58_g5405 | KELCH PROTEIN |
| MBSQW58_g5406 | |
| MBSQW58_g5407 | |
| MBSQW58_g5408 | RBPJ-INTERACTING AND TUBULIN-ASSOCIATED PROTEIN 1 |
| MBSQW58_g5409 | RETINOVIN-RELATED |
| MBSQW58_g541 | |
| MBSQW58_g5410 | KU AUTOANTIGEN DNA HELICASE |
| MBSQW58_g5411 | TOLL-LIKE RECEPTOR |
| MBSQW58_g5412 | JNK-INTERACTING PROTEIN 1-LIKE PROTEIN |
| MBSQW58_g5413 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| MBSQW58_g5414 | |
| MBSQW58_g5415 | TOLL-LIKE RECEPTOR |
| MBSQW58_g5416 | |
| MBSQW58_g5417 | TOLL-LIKE RECEPTOR |
| MBSQW58_g5418 | TOLL-LIKE RECEPTOR |
| MBSQW58_g5419 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| MBSQW58_g542 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| MBSQW58_g5420 | MYOSIN LIGHT CHAIN 1, 3 |
| MBSQW58_g5421 | ARCHEASE |
| MBSQW58_g5422 | PA14 DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g5423 | CGI-12 PROTEIN-RELATED |
| MBSQW58_g5424 | |
| MBSQW58_g5425 | GALACTOSIDE 2-L-FUCOSYLTRANSFERASE |
| MBSQW58_g5426 | |
| MBSQW58_g5427 | |
| MBSQW58_g5428 | TUDOR DOMAIN CONTAINING PROTEIN |
| MBSQW58_g5429 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
| MBSQW58_g543 | |
| MBSQW58_g5430 |
