About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.

Classification

Animalia (Kingdom); Echinodermata (Phylum); Echinozoa (Subphylum); Holothuroidea (Class); Paractinopoda (Subclass); Apodida (Order); Chiridotidae (Family); Chiridota (Genus); Chiridota heheva (Species)

Original Name

Chiridota heheva Pawson & Vance, 2004

Original Description/Redescription

1. PAWSON D L, VANCE D J. Chiridota heheva, new species, from Western Atlantic deep-sea cold seeps and anthropogenic habitats (Echinodermata: Holothuroidea: Apodida)[J]. Zootaxa, 2004, 534(1): 1–13-1–13. (Pawson et al., 2004)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianDeep sea1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62 53,240/1,22037.1270.836,527

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345

Gene Information

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Gene IDDescription
Chiridota_g26513
Chiridota_g26514
Chiridota_g26515
Chiridota_g26516
Chiridota_g26517
Chiridota_g26518UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Chiridota_g26519ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g2652EXPORTIN 1/5
Chiridota_g26520
Chiridota_g26521
Chiridota_g26522
Chiridota_g26523
Chiridota_g26524
Chiridota_g26525
Chiridota_g26526
Chiridota_g26527
Chiridota_g26528
Chiridota_g26529
Chiridota_g2653GLYCINE AMIDINOTRANSFERASE, MITOCHONDRIAL
Chiridota_g26530
Chiridota_g26531INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g26532
Chiridota_g26533
Chiridota_g26534UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Chiridota_g26535
Chiridota_g26536
Chiridota_g26537UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Chiridota_g26538
Chiridota_g26539
Chiridota_g2654
Chiridota_g26540
Chiridota_g26541ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Chiridota_g26542ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Chiridota_g26543
Chiridota_g26544
Chiridota_g26545
Chiridota_g26546
Chiridota_g26547
Chiridota_g26548DUF853 DOMAIN-CONTAINING PROTEIN
Chiridota_g26549INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g2655CLOCK-INTERACTING PACEMAKER
Chiridota_g26550CYCLIN-DEPENDENT KINASE 11A-LIKE
Chiridota_g26551
Chiridota_g26552
Chiridota_g26553
Chiridota_g26554
Chiridota_g26555
Chiridota_g26556
Chiridota_g26557
Chiridota_g26558ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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