About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.

Classification

Animalia (Kingdom); Echinodermata (Phylum); Echinozoa (Subphylum); Holothuroidea (Class); Paractinopoda (Subclass); Apodida (Order); Chiridotidae (Family); Chiridota (Genus); Chiridota heheva (Species)

Original Name

Chiridota heheva Pawson & Vance, 2004

Original Description/Redescription

1. PAWSON D L, VANCE D J. Chiridota heheva, new species, from Western Atlantic deep-sea cold seeps and anthropogenic habitats (Echinodermata: Holothuroidea: Apodida)[J]. Zootaxa, 2004, 534(1): 1–13-1–13. (Pawson et al., 2004)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianDeep sea1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62 53,240/1,22037.1270.836,527

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345

Gene Information

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Gene IDDescription
Chiridota_g26469
Chiridota_g2647DNA-DIRECTED RNA POLYMERASE
Chiridota_g26470NACHT DOMAIN-CONTAINING PROTEIN
Chiridota_g26471NACHT DOMAIN-CONTAINING PROTEIN
Chiridota_g26472NACHT DOMAIN-CONTAINING PROTEIN
Chiridota_g26473NACHT DOMAIN-CONTAINING PROTEIN
Chiridota_g26474
Chiridota_g26475
Chiridota_g26476
Chiridota_g26477UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Chiridota_g26478
Chiridota_g26479
Chiridota_g2648
Chiridota_g26480MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Chiridota_g26481REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g26482
Chiridota_g26483
Chiridota_g26484
Chiridota_g26485NG5
Chiridota_g26486MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21
Chiridota_g26487
Chiridota_g26488MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21
Chiridota_g26489
Chiridota_g2649CONTACTIN 5
Chiridota_g26490
Chiridota_g26491-
Chiridota_g26492
Chiridota_g26493
Chiridota_g26494
Chiridota_g26495
Chiridota_g26496
Chiridota_g26497UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Chiridota_g26498
Chiridota_g26499
Chiridota_g265
Chiridota_g2650
Chiridota_g26500MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Chiridota_g26501
Chiridota_g26502
Chiridota_g26503
Chiridota_g26504CXC2 DOMAIN-CONTAINING PROTEIN
Chiridota_g26505
Chiridota_g26506MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB
Chiridota_g26507
Chiridota_g26508
Chiridota_g26509
Chiridota_g2651DYNEIN 2 LIGHT INTERMEDIATE CHAIN, ISOFORM 2
Chiridota_g26510UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Chiridota_g26511
Chiridota_g26512
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