About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold596.4188
mRNA.BJAM.scaffold596.4189RETINOBLASTOMA-BINDING PROTEIN 5
mRNA.BJAM.scaffold596.4190RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN
mRNA.BJAM.scaffold596.4191PROTEIN FLATTOP
mRNA.BJAM.scaffold5965.17734
mRNA.BJAM.scaffold5965.17735
mRNA.BJAM.scaffold5970.17736IMMUNOGLOBULIN
mRNA.BJAM.scaffold5970.17737IMMUNOGLOBULIN
mRNA.BJAM.scaffold5970.17738CONTACTIN 5
mRNA.BJAM.scaffold5970.17739
mRNA.BJAM.scaffold5970.17740IMMUNOGLOBULIN
mRNA.BJAM.scaffold5970.17741TITIN
mRNA.BJAM.scaffold5970.17742
mRNA.BJAM.scaffold5973.17743TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold5973.17744TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold5978.17745DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold5978.17746
mRNA.BJAM.scaffold5979.17747UNCHARACTERIZED
mRNA.BJAM.scaffold598.4192DNA REPAIR-SCAFFOLDING PROTEIN SPIDR
mRNA.BJAM.scaffold598.4193DNA REPAIR-SCAFFOLDING PROTEIN SPIDR
mRNA.BJAM.scaffold598.4194EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
mRNA.BJAM.scaffold598.4195LYSOSOMAL-ASSOCIATED TRANSMEMBRANE PROTEIN
mRNA.BJAM.scaffold598.4196ZINC FINGER PROTEIN
mRNA.BJAM.scaffold598.4197TROPONIN C-AKIN-1 PROTEIN
mRNA.BJAM.scaffold5981.17748
mRNA.BJAM.scaffold5981.17749CORTACTIN AND DREBRIN
mRNA.BJAM.scaffold5984.17750
mRNA.BJAM.scaffold5984.17751POTASSIUM CHANNEL, SUBFAMILY K
mRNA.BJAM.scaffold5984.17752
mRNA.BJAM.scaffold5984.17753HOMEOBOX PROTEIN SIX
mRNA.BJAM.scaffold5984.17754HOMEOBOX PROTEIN SIX
mRNA.BJAM.scaffold5984.17755
mRNA.BJAM.scaffold5986.17756SPIRE
mRNA.BJAM.scaffold5986.17757SPIRE
mRNA.BJAM.scaffold5986.17758SPIRE
mRNA.BJAM.scaffold5986.17759
mRNA.BJAM.scaffold5986.17760EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED
mRNA.BJAM.scaffold5987.17761BASIGIN RELATED
mRNA.BJAM.scaffold5987.17762
mRNA.BJAM.scaffold5989.17763PROTON CHANNEL OTOP
mRNA.BJAM.scaffold5989.17764GERANYLGERANYL PYROPHOSPHATE SYNTHASE
mRNA.BJAM.scaffold5989.17765
mRNA.BJAM.scaffold599.4198
mRNA.BJAM.scaffold599.4199PROTEIN STAR
mRNA.BJAM.scaffold599.4200PROTEIN STAR
mRNA.BJAM.scaffold599.4201
mRNA.BJAM.scaffold5990.17766PLEXIN
mRNA.BJAM.scaffold5992.17767UNCHARACTERIZED
mRNA.BJAM.scaffold5992.17768ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold5992.17769ATP-BINDING CASSETTE SUB-FAMILY C
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