About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold590.4150
mRNA.BJAM.scaffold5900.17668SENTRIN-SPECIFIC PROTEASE
mRNA.BJAM.scaffold5900.17669
mRNA.BJAM.scaffold5902.17670SPONDIN
mRNA.BJAM.scaffold5902.17671FI18240P1-RELATED
mRNA.BJAM.scaffold5902.17672DUAL SPECIFICITY PROTEIN PHOSPHATASE 19
mRNA.BJAM.scaffold5902.17673ATP-DEPENDENT RNA HELICASE DBP3
mRNA.BJAM.scaffold5902.17674DEHYDROGENASE RELATED
mRNA.BJAM.scaffold5905.17675
mRNA.BJAM.scaffold5907.17676C3ORF6 PROTEIN-RELATED
mRNA.BJAM.scaffold5907.17677
mRNA.BJAM.scaffold5909.17678
mRNA.BJAM.scaffold5909.17679MITOGUARDIN
mRNA.BJAM.scaffold591.4151V-TYPE PROTON ATPASE SUBUNIT B
mRNA.BJAM.scaffold591.4152NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
mRNA.BJAM.scaffold591.4153NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
mRNA.BJAM.scaffold591.4154NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF
mRNA.BJAM.scaffold591.4155UNCHARACTERIZED
mRNA.BJAM.scaffold591.4156
mRNA.BJAM.scaffold591.4157IKB KINASE
mRNA.BJAM.scaffold591.4158
mRNA.BJAM.scaffold591.4159TRANSMEMBRANE PROTEIN 189
mRNA.BJAM.scaffold591.4160THYROID RECEPTOR INTERACTING PROTEIN RELATED
mRNA.BJAM.scaffold591.4161
mRNA.BJAM.scaffold5910.17680UNCHARACTERIZED
mRNA.BJAM.scaffold5910.17681
mRNA.BJAM.scaffold5911.17682FATTY ACID SYNTHASE
mRNA.BJAM.scaffold5912.17683E3 UBIQUITIN-PROTEIN LIGASE MIB2
mRNA.BJAM.scaffold5914.17684
mRNA.BJAM.scaffold5915.17685TRANSGELIN
mRNA.BJAM.scaffold5915.17686TRANSGELIN
mRNA.BJAM.scaffold5915.17687CAMK FAMILY PROTEIN KINASE
mRNA.BJAM.scaffold5915.17688
mRNA.BJAM.scaffold5918.17689
mRNA.BJAM.scaffold5919.17690SYNAPTIC ADHESION-LIKE MOLECULE SALM
mRNA.BJAM.scaffold592.4162IMPORTIN-7, 8, 11
mRNA.BJAM.scaffold592.4163MITOCHONDRIAL RIBOSOMAL PROTEIN S25
mRNA.BJAM.scaffold592.4164
mRNA.BJAM.scaffold592.4165
mRNA.BJAM.scaffold5920.17691POLY A POLYMERASE
mRNA.BJAM.scaffold5920.17692
mRNA.BJAM.scaffold5921.17695CYTOCHROME C OXIDASE, SUBUNIT II
mRNA.BJAM.scaffold5922.17696LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold5922.17697LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold5922.17698LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
mRNA.BJAM.scaffold5922.17699CELL DEATH ACTIVATOR CIDE
mRNA.BJAM.scaffold5926.17701THYROTROPIN-RELEASING HORMONE RECEPTOR
mRNA.BJAM.scaffold5927.17702ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold593.4166MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED
mRNA.BJAM.scaffold593.4167
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