About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.

Classification

Animalia (Kingdom); Echinodermata (Phylum); Echinozoa (Subphylum); Holothuroidea (Class); Paractinopoda (Subclass); Apodida (Order); Chiridotidae (Family); Chiridota (Genus); Chiridota heheva (Species)

Original Name

Chiridota heheva Pawson & Vance, 2004

Original description

(Pawson et al., 2004)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianDeep sea1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62 53,240/1,22037.1270.836,527

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345

Gene Information

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Gene IDDescription
Chiridota_g25659
Chiridota_g2566WD40 REPEAT PROTEIN
Chiridota_g25660
Chiridota_g25661
Chiridota_g25662
Chiridota_g25663EXPRESSED PROTEIN
Chiridota_g25664
Chiridota_g25665
Chiridota_g25666
Chiridota_g25667
Chiridota_g25668
Chiridota_g25669
Chiridota_g2567TGF-BETA FAMILY
Chiridota_g25670INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g25671
Chiridota_g25672
Chiridota_g25673
Chiridota_g25674
Chiridota_g25675REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g25676
Chiridota_g25677
Chiridota_g25678MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g25679MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g2568
Chiridota_g25680MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g25681MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g25682MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g25683MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g25684EPM2A-INTERACTING PROTEIN 1
Chiridota_g25685
Chiridota_g25686REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g25687
Chiridota_g25688
Chiridota_g25689
Chiridota_g2569
Chiridota_g25690
Chiridota_g25691SUZ DOMAIN-CONTAINING PROTEIN 1
Chiridota_g25692
Chiridota_g25693CDNA SEQUENCE BC021608
Chiridota_g25694
Chiridota_g25695
Chiridota_g25696
Chiridota_g25697
Chiridota_g25698
Chiridota_g25699
Chiridota_g257MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Chiridota_g2570REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g25700P53-INDUCED PROTEIN RELATED
Chiridota_g25701MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
Chiridota_g25702G-PROTEIN COUPLED RECEPTOR 153, 162
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