About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.

Classification

Animalia (Kingdom); Echinodermata (Phylum); Echinozoa (Subphylum); Holothuroidea (Class); Paractinopoda (Subclass); Apodida (Order); Chiridotidae (Family); Chiridota (Genus); Chiridota heheva (Species)

Original Name

Chiridota heheva Pawson & Vance, 2004

Original description

(Pawson et al., 2004)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianDeep sea1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62 53,240/1,22037.1270.836,527

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345

Gene Information

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Gene IDDescription
Chiridota_g25433SEVEN TRANSMEMBRANE PROTEIN 1-RELATED
Chiridota_g25434
Chiridota_g25435PROHIBITIN
Chiridota_g25436TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Chiridota_g25437RETROTRANSPOSON
Chiridota_g25438ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Chiridota_g25439C3ORF6 PROTEIN-RELATED
Chiridota_g2544
Chiridota_g25440
Chiridota_g25441
Chiridota_g25442
Chiridota_g25443CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Chiridota_g25444CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g25445
Chiridota_g25446
Chiridota_g25447
Chiridota_g25448
Chiridota_g25449EPM2A-INTERACTING PROTEIN 1
Chiridota_g2545TANDEM PH DOMAIN CONTAINING PROTEIN
Chiridota_g25450ENDONUCLEASE-RELATED
Chiridota_g25451GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN
Chiridota_g25452
Chiridota_g25453PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2
Chiridota_g25454PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M MEMBER 2
Chiridota_g25455DNA POLYMERASE
Chiridota_g25456
Chiridota_g25457
Chiridota_g25458PROTEIN CBG26694
Chiridota_g25459RE38146P
Chiridota_g2546NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
Chiridota_g25460RECEPTOR TRANSPORTING PROTEIN
Chiridota_g25461EGF-LIKE DOMAIN-CONTAINING PROTEIN
Chiridota_g25462FI04643P-RELATED
Chiridota_g25463FI04643P-RELATED
Chiridota_g25464
Chiridota_g25465
Chiridota_g25466
Chiridota_g25467
Chiridota_g25468OPSIN
Chiridota_g25469
Chiridota_g2547FAM98
Chiridota_g25470FI04643P-RELATED
Chiridota_g25471HYR DOMAIN-CONTAINING PROTEIN
Chiridota_g25472
Chiridota_g25473FI04643P-RELATED
Chiridota_g25474FI04643P-RELATED
Chiridota_g25475
Chiridota_g25476FI04643P-RELATED
Chiridota_g25477
Chiridota_g25478
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