Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00167510 | COLLAGEN ALPHA |
| SKAU_T00167520 | SI:CH211-266K2.1 |
| SKAU_T00167530 | SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG |
| SKAU_T00167540 | UNCHARACTERIZED |
| SKAU_T00167550 | - |
| SKAU_T00167560 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| SKAU_T00167570 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| SKAU_T00167580 | FORMIN |
| SKAU_T00167590 | LP21163P |
| SKAU_T00167600 | |
| SKAU_T00167610 | |
| SKAU_T00167620 | CYTOCHROME P450 26 |
| SKAU_T00167630 | SOLUTE CARRIER FAMILY 22 MEMBER |
| SKAU_T00167640 | SOLUTE CARRIER FAMILY 22 MEMBER |
| SKAU_T00167650 | HVA22-LIKE PROTEINS |
| SKAU_T00167660 | JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN |
| SKAU_T00167670 | PECANEX |
| SKAU_T00167680 | SERINE-THREONINE PROTEIN KINASE |
| SKAU_T00167690 | INTERFERON/INTERLEUKIN RECEPTOR |
| SKAU_T00167700 | INTERFERON/INTERLEUKIN RECEPTOR |
| SKAU_T00167710 | INTERFERON/INTERLEUKIN RECEPTOR |
| SKAU_T00167720 | |
| SKAU_T00167730 | |
| SKAU_T00167740 | |
| SKAU_T00167750 | UBIQUITIN THIOESTERASE |
| SKAU_T00167760 | P53-INDUCED PROTEIN RELATED |
| SKAU_T00167770 | GUANYL-NUCLEOTIDE EXCHANGE FACTOR |
| SKAU_T00167780 | CYTOCHROME C OXIDASE PROTEIN 20 |
| SKAU_T00167790 | GLYCOPROTEIN HORMONE BETA CHAIN |
| SKAU_T00167800 | DESUMOYLATING ISOPEPTIDASE |
| SKAU_T00167810 | ADENYLOSUCCINATE SYNTHETASE |
| SKAU_T00167820 | |
| SKAU_T00167830 | ZINC FINGER PROTEIN |
| SKAU_T00167840 | |
| SKAU_T00167850 | |
| SKAU_T00167860 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00167870 | SEROLOGICALLY DEFINED COLON CANCER ANTIGEN 8 |
| SKAU_T00167880 | CENTROSOMAL PROTEIN OF 170 KDA |
| SKAU_T00167890 | PHOSPHOLIPASE D - RELATED |
| SKAU_T00167900 | PHOSPHODIESTERASE HL |
| SKAU_T00167910 | ATP SYNTHASE GAMMA-RELATED |
| SKAU_T00167920 | PHOSPHODIESTERASE HL |
| SKAU_T00167930 | CLASP |
| SKAU_T00167940 | POLY ADP-RIBOSE GLYCOHYDROLASE |
| SKAU_T00167950 | 2-OXOGLUTARATE DEHYDROGENASE |
| SKAU_T00167960 | UPF0728 PROTEIN C10ORF53 |
| SKAU_T00167970 | CARNITINE O-ACYLTRANSFERASE |
| SKAU_T00167980 | - |
| SKAU_T00167990 | OPSIN |
| SKAU_T00168000 | SYNAPTIC ADHESION-LIKE MOLECULE SALM |
