The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032883521.1 | UNCHARACTERIZED |
| XP_032883522.1 | UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL |
| XP_032883523.1 | UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL |
| XP_032883524.1 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| XP_032883525.1 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| XP_032883526.1 | COILED-COIL DOMAIN-CONTAINING 166 |
| XP_032883527.1 | MALONATE-SEMIALDEHYDE DEHYDROGENASE |
| XP_032883528.1 | LIN52 FAMILY MEMBER |
| XP_032883529.1 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
| XP_032883530.1 | LIN52 FAMILY MEMBER |
| XP_032883531.1 | LIN52 FAMILY MEMBER |
| XP_032883532.1 | VISUAL SYSTEM HOMEOBOX 2 |
| XP_032883533.1 | VISUAL SYSTEM HOMEOBOX 2 |
| XP_032883534.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| XP_032883535.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| XP_032883536.1 | ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER |
| XP_032883537.1 | UPF0338 PROTEIN |
| XP_032883538.1 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
| XP_032883539.1 | IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL |
| XP_032883540.1 | NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED |
| XP_032883541.1 | NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED |
| XP_032883542.1 | VON WILLEBRAND FACTOR C AND EGF DOMAIN-CONTAINING PROTEIN |
| XP_032883543.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032883544.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032883545.1 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
| XP_032883546.1 | UNCHARACTERIZED |
| XP_032883547.1 | YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP |
| XP_032883548.1 | YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP |
| XP_032883549.1 | HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26 |
| XP_032883550.1 | DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED |
| XP_032883551.1 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
| XP_032883552.1 | RIBOSOMAL PROTEIN S6 KINASE |
| XP_032883553.1 | TANDEM C2 DOMAINS NUCLEAR PROTEIN |
| XP_032883554.1 | TANDEM C2 DOMAINS NUCLEAR PROTEIN |
| XP_032883555.1 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| XP_032883556.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| XP_032883557.1 | FIBRILLIN-RELATED |
| XP_032883558.1 | MYOSIN HEAVY CHAIN - RELATED |
| XP_032883559.1 | MYOSIN HEAVY CHAIN - RELATED |
| XP_032883560.1 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
| XP_032883561.1 | MYOSIN HEAVY CHAIN - RELATED |
| XP_032883562.1 | RE60986P |
| XP_032883563.1 | RE60986P |
| XP_032883564.1 | RE60986P |
| XP_032883565.1 | RE60986P |
| XP_032883566.1 | RE60986P |
| XP_032883567.1 | CYCLIN |
| XP_032883568.1 | CYCLIN |
| XP_032883569.1 | CYCLIN |
| XP_032883570.1 | AMYLOID BETA A4 PRECURSOR PROTEIN-BINDING FAMILY B |
