The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032883221.1 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
| XP_032883222.1 | FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY |
| XP_032883223.1 | DUMPY: SHORTER THAN WILD-TYPE |
| XP_032883224.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| XP_032883225.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| XP_032883226.1 | GLYCOGEN PHOSPHORYLASE |
| XP_032883227.1 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| XP_032883228.1 | CONTACTIN 5 |
| XP_032883229.1 | CONTACTIN 5 |
| XP_032883230.1 | MIS18-BINDING PROTEIN 1 |
| XP_032883231.1 | PROTEASE S8 TRIPEPTIDYL PEPTIDASE I CLN2 |
| XP_032883232.1 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| XP_032883233.1 | |
| XP_032883234.1 | |
| XP_032883235.1 | |
| XP_032883236.1 | |
| XP_032883237.1 | |
| XP_032883238.1 | |
| XP_032883239.1 | FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER |
| XP_032883240.1 | FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER |
| XP_032883241.1 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| XP_032883242.1 | HEME-BINDING PROTEIN-RELATED |
| XP_032883243.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP3 |
| XP_032883244.1 | 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI |
| XP_032883245.1 | PRE-MRNA PROCESSING PROTEIN PRP39-RELATED |
| XP_032883246.1 | CLASP |
| XP_032883247.1 | LD33804P |
| XP_032883248.1 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| XP_032883249.1 | LD33804P |
| XP_032883250.1 | HYPOTHETICAL LOC314168 |
| XP_032883251.1 | HYPOTHETICAL LOC314168 |
| XP_032883252.1 | HYPOTHETICAL LOC314168 |
| XP_032883253.1 | HYPOTHETICAL LOC314168 |
| XP_032883254.1 | HYPOTHETICAL LOC314168 |
| XP_032883255.1 | HYPOTHETICAL LOC314168 |
| XP_032883256.1 | HYPOTHETICAL LOC314168 |
| XP_032883257.1 | POTASSIUM CHANNEL, SUBFAMILY K |
| XP_032883258.1 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| XP_032883259.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 7 |
| XP_032883260.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 7 |
| XP_032883261.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 7 |
| XP_032883262.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 7 |
| XP_032883263.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 7 |
| XP_032883264.1 | TYROSINE-PROTEIN PHOSPHATASE |
| XP_032883265.1 | TYROSINE-PROTEIN PHOSPHATASE |
| XP_032883266.1 | TYROSINE-PROTEIN PHOSPHATASE |
| XP_032883267.1 | TYROSINE-PROTEIN PHOSPHATASE |
| XP_032883268.1 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| XP_032883269.1 | TYROSINE-PROTEIN PHOSPHATASE |
| XP_032883270.1 | TYROSINE-PROTEIN PHOSPHATASE |
