About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf6084_0.4
PE_Scaf6084_1.2
PE_Scaf6084_1.6TGF-BETA FAMILY
PE_Scaf6084_2.6NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1
PE_Scaf6084_2.7KELCH PROTEIN
PE_Scaf6087_2.2
PE_Scaf6089_1.4DELTA ADAPTIN-RELATED
PE_Scaf6091_0.5CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
PE_Scaf6091_0.6EGF-LIKE DOMAIN-CONTAINING PROTEIN
PE_Scaf6092_0.13RHO FAMILY GTPASE
PE_Scaf6092_1.3SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 2
PE_Scaf6092_1.5
PE_Scaf6092_2.4
PE_Scaf6092_2.8MUCIN 4-RELATED
PE_Scaf6096_0.2
PE_Scaf6097_0.1
PE_Scaf6099_0.4
PE_Scaf609_0.0
PE_Scaf609_0.10
PE_Scaf6100_0.0
PE_Scaf6100_0.1
PE_Scaf6100_0.12
PE_Scaf6100_0.2-
PE_Scaf6100_0.3
PE_Scaf6103_0.10P25 ALPHA-RELATED
PE_Scaf6103_0.12KNIRPS-RELATED PROTEIN-RELATED
PE_Scaf6103_0.19
PE_Scaf6103_0.2
PE_Scaf6103_0.2340S RIBOSOMAL PROTEIN S19
PE_Scaf610_0.11EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED
PE_Scaf6111_0.3NOVEL ZZ TYPE ZINC FINGER DOMAIN CONTAINING PROTEIN
PE_Scaf6111_0.4
PE_Scaf6111_0.7UNCHARACTERIZED
PE_Scaf6111_1.4AMINO ACID TRANSPORTER
PE_Scaf6111_1.5
PE_Scaf6111_2.6ALPHA-MANNOSIDASE
PE_Scaf6111_2.8
PE_Scaf6111_2.9
PE_Scaf6113_0.2
PE_Scaf6113_0.3
PE_Scaf6115_0.3PYRUVATE DEHYDROGENASE KINASE
PE_Scaf6116_0.1IRE1-RELATED
PE_Scaf611_0.0
PE_Scaf611_0.1
PE_Scaf6120_1.0
PE_Scaf6120_1.6ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
PE_Scaf6120_1.7
PE_Scaf6123_0.0
PE_Scaf6123_1.0
PE_Scaf6123_2.3KRUEPPEL-LIKE TRANSCRIPTION FACTOR
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