The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g22328 | SYNTENIN RELATED |
| MBSQW58_g22329 | PHOSPHATASE AND ACTIN REGULATOR PHACTR |
| MBSQW58_g2233 | CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN |
| MBSQW58_g22330 | PHOSPHATASE AND ACTIN REGULATOR PHACTR |
| MBSQW58_g22331 | |
| MBSQW58_g22332 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| MBSQW58_g22333 | STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 |
| MBSQW58_g22334 | ADDITIONAL SEX COMBS LIKE PROTEIN ASXL |
| MBSQW58_g22335 | COILED-COIL DOMAIN-CONTAINING PROTEIN 178 |
| MBSQW58_g22336 | COLLAGEN ALPHA |
| MBSQW58_g22337 | CHROMOSOME 6 C6ORF201 HOMOLOG |
| MBSQW58_g22338 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| MBSQW58_g22339 | |
| MBSQW58_g2234 | PROTEIN CBG04600 |
| MBSQW58_g22340 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| MBSQW58_g22341 | |
| MBSQW58_g22342 | POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1 |
| MBSQW58_g22343 | |
| MBSQW58_g22344 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 8 |
| MBSQW58_g22345 | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED |
| MBSQW58_g22346 | DNA-DAMAGE-INDUCIBLE TRANSCRIPT 4 PROTEIN DDIT4 |
| MBSQW58_g22347 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g22348 | |
| MBSQW58_g22349 | |
| MBSQW58_g2235 | PROTEIN AD-016-RELATED |
| MBSQW58_g22350 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g22351 | ACTIVATOR OF S-PHASE KINASE-RELATED |
| MBSQW58_g22352 | RAG1-ACTIVATING PROTEIN 1 |
| MBSQW58_g22353 | HISTONE H2A |
| MBSQW58_g22354 | GDOWN1 |
| MBSQW58_g22355 | HOMO-OLIGOMERIC FLAVIN CONTAINING CYS DECARBOXYLASE FAMILY |
| MBSQW58_g22356 | NEUROBLASTOMA-AMPLIFIED SEQUENCE |
| MBSQW58_g22357 | C2H2 ZINC FINGER CGI-62-RELATED |
| MBSQW58_g22358 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| MBSQW58_g22359 | GROWTH ARREST-SPECIFIC PROTEIN 1 |
| MBSQW58_g2236 | TRANSPORTIN 3 AND IMPORTIN 13 |
| MBSQW58_g22360 | TUBULIN-SPECIFIC CHAPERONE A |
| MBSQW58_g22361 | LIPID PHOSPHATE PHOSPHATASE |
| MBSQW58_g22362 | LYSOSOMAL ACID LIPASE-RELATED |
| MBSQW58_g22363 | |
| MBSQW58_g22364 | CYTOKINE RECEPTOR |
| MBSQW58_g22365 | GLUTARYL-COA DEHYDROGENASE, MITOCHONDRIAL |
| MBSQW58_g22366 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
| MBSQW58_g22367 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
| MBSQW58_g22368 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g22369 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
| MBSQW58_g2237 | RAS-LIKE FAMILY MEMBER 11 |
| MBSQW58_g22370 | |
| MBSQW58_g22371 | MPS ONE BINDER KINASE ACTIVATOR-LIKE MOB |
| MBSQW58_g22372 |
