The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032880971.1 | INOSITOL 5-PHOSPHATASE |
| XP_032880972.1 | SYNTAXIN |
| XP_032880973.1 | PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED |
| XP_032880974.1 | PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED |
| XP_032880975.1 | INNER KINETOCHORE SUBUNIT MAL2 |
| XP_032880976.1 | ADENYLATE CYCLASE TYPE 1 |
| XP_032880977.1 | PRO-OPIOMELANOCORTIN |
| XP_032880978.1 | UNCHARACTERIZED |
| XP_032880979.1 | UNCHARACTERIZED |
| XP_032880980.1 | ACYL-COA DESATURASE |
| XP_032880981.1 | UNCHARACTERIZED |
| XP_032880982.1 | UNCHARACTERIZED |
| XP_032880983.1 | UNCHARACTERIZED |
| XP_032880984.1 | UNCHARACTERIZED |
| XP_032880985.1 | UNCHARACTERIZED |
| XP_032880986.1 | RAB FAMILY |
| XP_032880987.1 | RAB FAMILY |
| XP_032880988.1 | RAB FAMILY |
| XP_032880989.1 | ZGC:162509 |
| XP_032880990.1 | CYSTATIN-F |
| XP_032880991.1 | STRICTOSIDINE SYNTHASE-RELATED |
| XP_032880992.1 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| XP_032880993.1 | EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER |
| XP_032880994.1 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| XP_032880995.1 | XPA-BINDING PROTEIN 1-RELATED |
| XP_032880996.1 | XPA-BINDING PROTEIN 1-RELATED |
| XP_032880997.1 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| XP_032880998.1 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| XP_032880999.1 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| XP_032881000.1 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| XP_032881001.1 | FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE |
| XP_032881002.1 | ACETYL-COENZYME A SYNTHETASE |
| XP_032881003.1 | VISUAL SYSTEM HOMEOBOX 2 |
| XP_032881004.1 | ADENOSINE/GUANOSINE DIPHOSPHATASE |
| XP_032881005.1 | BARRIER TO AUTOINTEGRATION FACTOR 2 |
| XP_032881006.1 | FLAP ENDONUCLEASE FAMILY MEMBER |
| XP_032881007.1 | FLAP ENDONUCLEASE FAMILY MEMBER |
| XP_032881008.1 | FLAP ENDONUCLEASE FAMILY MEMBER |
| XP_032881009.1 | FLAP ENDONUCLEASE FAMILY MEMBER |
| XP_032881010.1 | GOLGI MEMBRANE PROTEIN YIP1 |
| XP_032881011.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| XP_032881012.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| XP_032881013.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| XP_032881014.1 | RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN |
| XP_032881015.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| XP_032881016.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| XP_032881017.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| XP_032881018.1 | (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME |
| XP_032881019.1 | UNCHARACTERIZED |
| XP_032881020.1 | PROLACTIN REGULATORY ELEMENT BINDING PROTEIN |
