The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032880821.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032880822.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032880823.1 | UNCHARACTERIZED |
| XP_032880824.1 | ZINC FINGER PROTEIN |
| XP_032880825.1 | ZINC FINGER PROTEIN |
| XP_032880826.1 | ZINC FINGER PROTEIN |
| XP_032880827.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| XP_032880828.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| XP_032880829.1 | IMMUNOGLOBULIN |
| XP_032880830.1 | MADF DOMAIN TRANSCRIPTION FACTOR |
| XP_032880831.1 | MADF DOMAIN TRANSCRIPTION FACTOR |
| XP_032880832.1 | MADF DOMAIN TRANSCRIPTION FACTOR |
| XP_032880833.1 | MADF DOMAIN TRANSCRIPTION FACTOR |
| XP_032880834.1 | MADF DOMAIN TRANSCRIPTION FACTOR |
| XP_032880835.1 | TRANSPOSON |
| XP_032880836.1 | TRANSPOSON |
| XP_032880837.1 | TRANSPOSON |
| XP_032880838.1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 |
| XP_032880839.1 | TRANSPOSON |
| XP_032880840.1 | TRANSPOSON |
| XP_032880841.1 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
| XP_032880842.1 | SI:CH211-67E16.11 |
| XP_032880843.1 | SI:CH211-67E16.11 |
| XP_032880844.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| XP_032880845.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| XP_032880846.1 | RAD25/XP-B DNA REPAIR HELICASE |
| XP_032880847.1 | RAD25/XP-B DNA REPAIR HELICASE |
| XP_032880848.1 | SERINE/THREONINE PROTEIN KINASE |
| XP_032880849.1 | PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE |
| XP_032880850.1 | PEROXISOMAL TRANS-2-ENOYL-COA REDUCTASE |
| XP_032880851.1 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
| XP_032880852.1 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
| XP_032880853.1 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
| XP_032880854.1 | |
| XP_032880855.1 | GATA-TYPE DOMAIN-CONTAINING PROTEIN |
| XP_032880856.1 | CELL ADHESION MOLECULE |
| XP_032880857.1 | TESMIN/TSO1-RELATED |
| XP_032880858.1 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN-RELATED |
| XP_032880859.1 | KU AUTOANTIGEN DNA HELICASE |
| XP_032880860.1 | ADP-RIBOSYLATION-LIKE FACTOR 6-INTERACTING PROTEIN |
| XP_032880861.1 | |
| XP_032880862.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032880863.1 | CELL ADHESION MOLECULE |
| XP_032880864.1 | TESMIN/TSO1-RELATED |
| XP_032880865.1 | E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE |
| XP_032880866.1 | CELL ADHESION MOLECULE |
| XP_032880867.1 | CELL ADHESION MOLECULE |
| XP_032880868.1 | ARP2/3 COMPLEX 34 KDA SUBUNIT |
| XP_032880869.1 | TRANSMEMBRANE PROTEIN 169 |
| XP_032880870.1 | TRANSMEMBRANE PROTEIN 169 |
