About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3443.13842LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED
mRNA.BJAM.scaffold3443.13843SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold3444.13844SI:CH211-201H21.5-RELATED
mRNA.BJAM.scaffold3448.13845GLYCOGENIN SUBFAMILY MEMBER
mRNA.BJAM.scaffold345.2616CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold3450.13846UNC80
mRNA.BJAM.scaffold3451.13847HEXOKINASE
mRNA.BJAM.scaffold3451.13848PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
mRNA.BJAM.scaffold3451.13849RAS-RELATED PROTEIN RAB
mRNA.BJAM.scaffold3452.13850
mRNA.BJAM.scaffold3453.13852TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 11
mRNA.BJAM.scaffold3453.13853PROFILIN
mRNA.BJAM.scaffold3456.13855
mRNA.BJAM.scaffold3458.13856ZINC FINGER PROTEIN-RELATED
mRNA.BJAM.scaffold3458.13857ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold3458.13858TESTIS-SPECIFIC Y-ENCODED PROTEIN
mRNA.BJAM.scaffold3458.13859TESTIS-SPECIFIC Y-ENCODED PROTEIN
mRNA.BJAM.scaffold3458.13860
mRNA.BJAM.scaffold3459.13861RNA HELICASE
mRNA.BJAM.scaffold3459.13862RNA HELICASE
mRNA.BJAM.scaffold3459.13863TRYPSIN-RELATED
mRNA.BJAM.scaffold3459.13864TRANSMEMBRANE PROTEASE SERINE
mRNA.BJAM.scaffold346.2617
mRNA.BJAM.scaffold346.2618UBIQUITIN-ACTIVATING ENZYME E1
mRNA.BJAM.scaffold346.2619HEAT SHOCK PROTEIN 70KDA
mRNA.BJAM.scaffold346.2620METHYLTRANSFERASE-RELATED
mRNA.BJAM.scaffold346.2621
mRNA.BJAM.scaffold346.2622PHOSPHOGLYCERATE MUTASE
mRNA.BJAM.scaffold346.2623ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
mRNA.BJAM.scaffold346.2624
mRNA.BJAM.scaffold346.2625
mRNA.BJAM.scaffold346.2626
mRNA.BJAM.scaffold346.2627TRANSCRIPTIONAL REPRESSOR P66-RELATED
mRNA.BJAM.scaffold3460.13865
mRNA.BJAM.scaffold3460.13866VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT
mRNA.BJAM.scaffold3462.13867
mRNA.BJAM.scaffold3462.13868
mRNA.BJAM.scaffold3463.13869HISTONE H3
mRNA.BJAM.scaffold3464.13870CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
mRNA.BJAM.scaffold3464.13871CONSTITUTIVE COACTIVATOR OF PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA
mRNA.BJAM.scaffold3464.13872TRANSFERRIN
mRNA.BJAM.scaffold3464.13873
mRNA.BJAM.scaffold3464.13874ZINC FINGER PROTEIN
mRNA.BJAM.scaffold3464.13875KRUEPPEL-LIKE TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold3464.13876ZINC FINGER PROTEIN
mRNA.BJAM.scaffold3464.13877ZINC FINGER PROTEIN
mRNA.BJAM.scaffold3464.13878SOLUTE CARRIER FAMILY 17
mRNA.BJAM.scaffold3466.13879ACTIN
mRNA.BJAM.scaffold3466.13880ACTIN
mRNA.BJAM.scaffold3466.13881
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