About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3397.13739UNCHARACTERIZED
mRNA.BJAM.scaffold3398.13740GENERAL VESICULAR TRANSPORT FACTOR P115
mRNA.BJAM.scaffold3398.13741GENERAL VESICULAR TRANSPORT FACTOR P115
mRNA.BJAM.scaffold3398.13742
mRNA.BJAM.scaffold3398.13743
mRNA.BJAM.scaffold3398.13744
mRNA.BJAM.scaffold3398.13745RYBP AND YAF2-RELATED
mRNA.BJAM.scaffold3399.13746
mRNA.BJAM.scaffold3399.13747EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
mRNA.BJAM.scaffold34.261
mRNA.BJAM.scaffold34.262DOPEY-RELATED
mRNA.BJAM.scaffold34.263
mRNA.BJAM.scaffold34.264DOPEY-RELATED
mRNA.BJAM.scaffold34.265DOPEY-RELATED
mRNA.BJAM.scaffold34.266DOPEY-RELATED
mRNA.BJAM.scaffold34.267BRAKELESS PROTEIN
mRNA.BJAM.scaffold34.268
mRNA.BJAM.scaffold34.269GMP SYNTHASE-RELATED
mRNA.BJAM.scaffold34.270GMP SYNTHASE-RELATED
mRNA.BJAM.scaffold34.271GMP SYNTHASE-RELATED
mRNA.BJAM.scaffold34.272
mRNA.BJAM.scaffold34.273
mRNA.BJAM.scaffold34.274LD44813P
mRNA.BJAM.scaffold340.2582FROUNT PROTEIN-RELATED
mRNA.BJAM.scaffold340.2583FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold340.2584FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold340.2586ERYTHROID DIFFERENTIATION-RELATED FACTOR 1
mRNA.BJAM.scaffold340.2587CHROMOSOME 1 OPEN READING FRAME 112
mRNA.BJAM.scaffold340.2588
mRNA.BJAM.scaffold340.2589POTASSIUM CHANNEL TETRAMERISATION DOMAIN CONTAINING PROTEIN
mRNA.BJAM.scaffold340.2590
mRNA.BJAM.scaffold3400.13748
mRNA.BJAM.scaffold3400.13749AMINOMETHYLTRANSFERASE
mRNA.BJAM.scaffold3400.13750SARCOSINE DEHYDROGENASE-RELATED
mRNA.BJAM.scaffold3400.13751RIBOSOME BIOGENESIS PROTEIN
mRNA.BJAM.scaffold3400.13752
mRNA.BJAM.scaffold3401.13753
mRNA.BJAM.scaffold3401.13754TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER
mRNA.BJAM.scaffold3403.13755TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold3403.13756
mRNA.BJAM.scaffold3403.13757
mRNA.BJAM.scaffold3404.13758CCCH ZINGC FINGER
mRNA.BJAM.scaffold3404.13759VILLIN
mRNA.BJAM.scaffold3405.13760BESTROPHIN
mRNA.BJAM.scaffold3405.13761
mRNA.BJAM.scaffold3405.13762BESTROPHIN
mRNA.BJAM.scaffold3405.13763
mRNA.BJAM.scaffold3405.13764
mRNA.BJAM.scaffold3405.13765PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED
mRNA.BJAM.scaffold3405.13766
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