About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 237 238 239 240 241 242 243 244 245 246 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2189458.1SARCOSINE DEHYDROGENASE-RELATED
KAK2189459.1FUMARATE REDUCTASE
KAK2189460.1NF-KAPPA-B INHIBITOR ALPHA
KAK2189461.1INHIBITOR OF GROWTH PROTEIN
KAK2189462.1NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
KAK2189463.1GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA
KAK2189464.1RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3
KAK2189465.1ANAPHASE-PROMOTING COMPLEX SUBUNIT 2
KAK2189466.1-
KAK2189467.1TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
KAK2189468.1UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
KAK2189469.1PHOSPHATIDYLINOSITOL GLYCAN, CLASS N
KAK2189470.1-
KAK2189471.1TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1
KAK2189472.1-
KAK2189473.1TRANSLIN-ASSOCIATED FACTOR X-INTERACTING PROTEIN 1
KAK2189474.1-
KAK2189475.1RAN BINDING PROTEIN 9-RELATED
KAK2189476.1-
KAK2189477.1UBIQUITIN-CONJUGATING ENZYME E2
TOP