About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g20618
Chiridota_g20619
Chiridota_g2062INTEGRAL MEMBRANE PROTEIN GPR137
Chiridota_g20620
Chiridota_g20621
Chiridota_g20622
Chiridota_g20623SORBITOL DEHYDROGENASE
Chiridota_g20624
Chiridota_g20625SORBITOL DEHYDROGENASE
Chiridota_g20626HOMEOBOX PROTEIN ARISTALESS
Chiridota_g20627HOMEOBOX PROTEIN, PUTATIVE-RELATED
Chiridota_g20628
Chiridota_g20629IMPORTIN-7, 8, 11
Chiridota_g2063RAB3-GAP REGULATORY DOMAIN
Chiridota_g20630IMPORTIN-7, 8, 11
Chiridota_g20631RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Chiridota_g20632
Chiridota_g20633
Chiridota_g20634TUMOR NECROSIS FACTOR INDUCED PROTEIN
Chiridota_g20635
Chiridota_g20636UNCHARACTERIZED
Chiridota_g20637-
Chiridota_g20638EPM2A-INTERACTING PROTEIN 1
Chiridota_g20639RETROTRANSPOSON
Chiridota_g2064RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Chiridota_g20640-
Chiridota_g20641
Chiridota_g20642
Chiridota_g20643-
Chiridota_g20644MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S30/P52 PRO-APOTOTIC PROTEIN
Chiridota_g20645
Chiridota_g20646
Chiridota_g20647
Chiridota_g20648
Chiridota_g20649
Chiridota_g2065
Chiridota_g20650LEUCOKININ RECEPTOR-RELATED
Chiridota_g20651LEUCOKININ RECEPTOR-RELATED
Chiridota_g20652
Chiridota_g20653
Chiridota_g20654
Chiridota_g20655
Chiridota_g20656
Chiridota_g20657VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE
Chiridota_g20658AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Chiridota_g20659
Chiridota_g2066DNA REPAIR PROTEIN XRCC3
Chiridota_g20660
Chiridota_g20661
Chiridota_g20662
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